Pairwise Alignments

Query, 198 a.a., outer membrane protein A from Alteromonas macleodii MIT1002

Subject, 321 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 30/189 (15%)

Query: 15  ASISAMASFGAHAQSNQIEAKDSGFYVGGNYGYLRVEGE----DDFDDDKDVWQGLVGYK 70
           A ISA   F + A   ++       YVGG  G   ++         +DD  V    +GY+
Sbjct: 6   AIISATLLFASSAAVAEV-------YVGGKVGKSWLDDACLAGQSCEDDDQVVGAFLGYQ 58

Query: 71  FNEWIAIEGGYIDFGDY-GNDLAGAETDGYTAAIKGILPLTERFSLYAKAGQLWSETEYN 129
            N+W+++E GY   G +    L   +    T A K  +PLTE  +LY K G  +   +Y 
Sbjct: 59  ANKWLSLEAGYDYLGKFTAAGLNDEKVQAVTLAPKLSIPLTEGIALYGKVGGAY--VDYG 116

Query: 130 FAGVSRDNDDESLFVGAGLSYAITSNFLVNAEYTVYDTELDADEAFDDIDDTDFETDLKQ 189
                   DD S    AGL +    N  +  EY          +   DI++       + 
Sbjct: 117 ------SKDDYSYLGAAGLEFNTNHNVTMRLEY----------QNLTDINNDIVRARAET 160

Query: 190 ASIGVEYRF 198
           A++G+ Y+F
Sbjct: 161 ATLGIAYKF 169