Pairwise Alignments

Query, 438 a.a., Chemotaxis regulator BdlA from Alteromonas macleodii MIT1002

Subject, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (301), Expect = 1e-31
 Identities = 71/176 (40%), Positives = 105/176 (59%), Gaps = 4/176 (2%)

Query: 249 KLATDITEQVARENAVSSAADIAYRSSNTTDQIATRGKEVISELLSEMSSLSQQMDRAKE 308
           +LAT IT+       ++  A  A  ++      A  G   + + +  +  ++ QM  A  
Sbjct: 276 QLATAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASS 335

Query: 309 GINALDAQSQQIATIIGSISAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLASR 368
            I  L +QS  I  ++  I +IAEQTNLLALNAAIEAARAGDQGRGFAVVADEVR+LA R
Sbjct: 336 VIEQLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQR 395

Query: 369 TTEATEEIINVVKHNQTLATDAVNLVNEGDEKAQSGLNYAREAGE----VIEQIQD 420
           +TE+T+EI  V+   QT   +AV  + +G++ + S ++ A  +G+    ++ Q+ D
Sbjct: 396 STESTKEIQEVITSIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSD 451



 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 62/328 (18%), Positives = 122/328 (37%), Gaps = 74/328 (22%)

Query: 160 LNGNIQDANEAFLKAVKYRLNDIKGQHHRIFCDTEYANSREYKTFWERLTQGEFVAGRFE 219
           L+ +I+ A++ F     Y L+++  Q H +    +      +K  WE L  G+   G  +
Sbjct: 26  LSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPDMP-PEAFKDMWEHLKAGKSWMGMVK 84

Query: 220 RFDAHGNTIWLEATYNPI--------------------CDSHGRMYKVVKLA-------- 251
               +G+  W++A  +PI                     D+  ++YK +K          
Sbjct: 85  NRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSRQHVDNADKLYKEIKAGKTPWQLKM 144

Query: 252 --TDITEQVAR----ENAVSSAAD-----------------IAYRSSNTTDQIATRGKEV 288
             T + +++         VS AAD                 +AY+ +   + ++   ++V
Sbjct: 145 PRTRLWQRLGLGFIVAAGVSFAADRFFAGAGLPLMLVLTILMAYQFTRRLETLSQEARKV 204

Query: 289 ISELLSEMSSLSQQMDRAKEGINALDAQSQQIATIIGSISAIAEQTNLLALNAAIEAARA 348
               L E+   + ++D   E   A+  +  ++  ++G I   + Q          EAA+ 
Sbjct: 205 FDNPLMEL-VYNGRVDDLSEIQLAMKMRQSELNAVVGRIQDSSIQIG--------EAAKM 255

Query: 349 GDQGRGFAVVADEVRQLASRTTEATEEIINVVKHNQTLATDAVNLVNEGDEKAQSGLNYA 408
             Q    A  AD +       T  TE++   +      AT+  +      +      N A
Sbjct: 256 SSQNS--ATTADNL----DAQTRETEQLATAITQMNITATEIAHNAQAASDATVHAKNAA 309

Query: 409 REAGEVIEQIQDGAKEVVDAVGQFSSRL 436
           R+    +EQ        VDA+G+ +S++
Sbjct: 310 RDGMHAVEQ-------TVDAIGEMASQM 330