Pairwise Alignments

Query, 240 a.a., Inner membrane protein YgaZ from Alteromonas macleodii MIT1002

Subject, 239 a.a., branched-chain amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 16/217 (7%)

Query: 12  QGVIDGLPLLGGYIPVAISFGVIAVQAGFSTLEATLISVFIYAGASQFLLVAMVASGAPL 71
           QG I  LPL    +P  +  G  A++AG S +E+  +S  +YAGA+Q + + M  +GA L
Sbjct: 20  QGTIAMLPLSIAVLPWGLLAGSFAIEAGLSVIESQALSAVLYAGAAQLVAIGMFKTGAGL 79

Query: 72  WLAVCMTLLVNVRHVVYAPNLVPYL-PQSKAWPY-LMHGLTDQIFALAHTRLPLMDDAKK 129
              +  T  +  RH +Y+ ++   + P    W   L   LTD++FA+   +     D + 
Sbjct: 80  LSLLIATFFITSRHFLYSVSMRSKISPLPLRWRLTLGFLLTDELFAICGAQ----SDKQF 135

Query: 130 VDWFK-GVSMVAWLSWIVGTALGGIAGDSL--TQQWPILDSVMPFALPALFLVLLAPKFS 186
             W+  G  +  +L W + + +G +AG  L    QW      + FA+ A F+ ++ P   
Sbjct: 136 NRWYALGAGLSFYLIWNLASLVGIVAGSYLPDLNQWG-----LEFAVAATFIAIVIPNIK 190

Query: 187 SKLWSATLFVTMTAALFLALSAFKNAAIPLAALCGAI 223
           S  W   + V     L + L+        + A  GA+
Sbjct: 191 S--WPVLISVLTALVLSVLLTVMGIEGSLMFASIGAM 225