Pairwise Alignments

Query, 347 a.a., Twitching mobility protein from Alteromonas macleodii MIT1002

Subject, 368 a.a., twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

 Score =  256 bits (653), Expect = 8e-73
 Identities = 140/335 (41%), Positives = 215/335 (64%), Gaps = 3/335 (0%)

Query: 1   MDITELLAFSVKNNASDLHLSAGLPPIIRVDGEMRKLNVPALDHKQVHGLVYEIMNDMQR 60
           M++ + L   + + ASDL+++ G P + RVDGE+R     AL    V  L++ +M+D ++
Sbjct: 1   MELNQYLDGMLTHKASDLYITVGAPILYRVDGELRAQG-EALSVADVTALLHAMMDDARQ 59

Query: 61  KEYEENLETDFSFEVNGLSRFRVNAFVQNRGAAAVLRTIPSKVLTLDDLGAPEIFKEIIN 120
            E+++  E +F+  V    RFRV+AF Q     AV+R I +++ T ++L  PE+ + +  
Sbjct: 60  AEFKQTREANFAV-VRDSGRFRVSAFFQRELPGAVIRRIETRIPTFEELKLPEVLQNLAI 118

Query: 121 QPTGIVLVTGATGSGKSTTLAAMVDHINTHKREHILTIEDPIEFVHDNKLSLVNQREVHR 180
              G+VLV GATGSGKSTT+AAM  + N H+  HILT+EDPIEFVH++K  +V QREV  
Sbjct: 119 AKRGLVLVVGATGSGKSTTMAAMTGYRNQHRTGHILTVEDPIEFVHEHKRCIVTQREVGL 178

Query: 181 DTHSFNNALRSALREDPDVILVGELRDLETIRLAISAAETGHLVFGTLHTNSAPKTIDRI 240
           DT S+  AL+++LR+ PD+IL+GE+R  ET+  A++ AETGHL   TLH N+A + ++RI
Sbjct: 179 DTESYEVALKNSLRQAPDMILIGEIRSRETMEYAMTFAETGHLCMATLHANNANQALERI 238

Query: 241 IDVFPAEEKAMVRSMLSESLRAVISQTLLK-KVGGGRVAAHEIMVGIPAIRNLIREDKVP 299
           + + P E++      LS +L+ VI+Q LL+ K G GR    E+++  P I +LIR  ++ 
Sbjct: 239 LHLVPKEQREQFLLDLSLNLKGVIAQQLLRDKNGKGRHGVFEVLLNSPRIADLIRRGELH 298

Query: 300 QMYSVIQTGQAHGMQTMDQCLQRLVAMGVITKQDA 334
           ++ + +   Q  GMQT DQ L +LV    I++QDA
Sbjct: 299 ELKATMARSQEVGMQTFDQALYQLVVDDKISEQDA 333