Pairwise Alignments

Query, 280 a.a., Small-conductance mechanosensitive channel from Alteromonas macleodii MIT1002

Subject, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score =  122 bits (305), Expect = 1e-32
 Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 4/227 (1%)

Query: 50  RRLMAKSKYDNMLVDF-LEAIL---SAILMLFVIVASLDQLGVDTTSLVAILGAAGLAIG 105
           R L+ K   +    ++ L+A +   SA+++ F IV  +  L     +L+   G  G+ +G
Sbjct: 115 RYLLLKGSQEGKFAEYRLKATVFHYSAMIIAFGIVFQMLGLTSKLGTLLVAGGITGIILG 174

Query: 106 LSLQDSLKNFAAGVMLLVFKPFKAGDFVEAAGTAGSIVKIGIFTTTMNTPDNKEIIVPNG 165
            + Q  + NF +G+ L   KP K GD V+    +G +  I + +T + T D   + +PN 
Sbjct: 175 FASQTVVANFISGIFLYFDKPLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNE 234

Query: 166 NIYGGNITNYSARDTRRVDMVVGIGYDADLLKAKRILEEMVAADERILAEPAPKIAVSEL 225
            ++   I N      RRVD+VVGI Y  D  +A  I+ +++     +L EP  +I V++L
Sbjct: 235 KVFNSEIVNNKKYPARRVDIVVGIAYKEDAQRAMDIISKILENMTYVLVEPEFQIFVNDL 294

Query: 226 ADSSVNFVVRPWVNSADFWGVKFDFTENVKLRFDEEGISIPFPQMDV 272
            +SSV+  V+ W  S  ++ VK +  +N+K  FD+E + IPFPQ  V
Sbjct: 295 GNSSVDISVKAWTPSEKWYDVKMELVKNIKKEFDKEKVEIPFPQRTV 341