Pairwise Alignments

Query, 319 a.a., Chemotaxis protein CheV from Alteromonas macleodii MIT1002

Subject, 308 a.a., chemotaxis protein CheW from Pseudomonas fluorescens FW300-N2C3

 Score =  290 bits (742), Expect = 3e-83
 Identities = 151/309 (48%), Positives = 209/309 (67%), Gaps = 5/309 (1%)

Query: 3   SSVLSSVDQRTKLVGENRLELLMFQLGTRHIFAMNVFKIKEVINVPKLNIMPGSHHNLKG 62
           + V+ SV+QRT+LVG+NRLELL+F+L  + ++ +NVFK++EV+  PKL +MP S   + G
Sbjct: 2   AGVMDSVNQRTQLVGQNRLELLLFRLDGQQMYGINVFKVREVLQCPKLTLMPKSSPVVCG 61

Query: 63  VMNYRGSSIPIIDLRQAIKMRGAATQATAKNVIITEYNRSVQGFIIGEVKNIVNTSWGTI 122
           V N RG++IPI+DL  A    G     +   VIITEYN   QGF++  V+ IVN +W  I
Sbjct: 62  VANIRGATIPILDLAMATGS-GRLLDQSNPFVIITEYNTKTQGFLVRSVERIVNMNWEEI 120

Query: 123 QPPPSGIGKSNYLTAITQVNVEGKQELVEIIDVEKVLAEIIDYDTSISEEVLDKDIVNHF 182
            PPP G G+ +YLTA+T+V+     +LVEIIDVEK+LAE+     +IS  V+D +  +  
Sbjct: 121 HPPPKGTGRDHYLTAVTRVD----NQLVEIIDVEKILAEVAPTPEAISAGVVDAETQHKA 176

Query: 183 LGKKVLIVDDSGTARKQMKDTLEQLGITIIERKNGAQALALLKKWADEGKNPTDEILLMF 242
           +  +VL VDDS  ARKQ+   L+ +G+ ++   +G QAL  L+   DEGK P +E L+M 
Sbjct: 177 ISLRVLTVDDSSVARKQVTRCLQTVGVEVVALNDGRQALDYLRALVDEGKKPEEEFLMMI 236

Query: 243 TDAEMPEMDGYRLTSEVRNDPRMSNLFIALNTSLSGSFNDAMVEKVGCDRFISKFQPDML 302
           +D EMPEMDGY LTSE+R+DPRM  L I L+TSLSG FN AMV+KVG D F++KF+PD L
Sbjct: 237 SDIEMPEMDGYTLTSEIRSDPRMQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDL 296

Query: 303 VDVAQQRLR 311
                 R++
Sbjct: 297 ASRVVDRIK 305