Pairwise Alignments

Query, 319 a.a., Chemotaxis protein CheV from Alteromonas macleodii MIT1002

Subject, 302 a.a., chemotaxis protein CheW from Pseudomonas fluorescens FW300-N2E3

 Score =  142 bits (358), Expect = 1e-38
 Identities = 91/278 (32%), Positives = 145/278 (52%), Gaps = 10/278 (3%)

Query: 21  LELLMFQLGTRHIFAMNVFKIKEVINVPKLNIMPGSHHNLKGVMNYRGSSIPIIDLRQAI 80
           L LL+F L +  + A+N+ K+ E+I  P L  +P SH ++KG+   RG+S+ +IDL +AI
Sbjct: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLTRLPESHPHVKGIATLRGTSLSVIDLSRAI 70

Query: 81  KMRGAATQATAKNVIITEYNRSVQGFIIGEVKNIVNTSWGTIQPPPSGIGKSN-YLTAIT 139
             R          +I+T+ +RS QG  +  V  IV+     I+PPP G G    Y+T +T
Sbjct: 71  GER-PLEDPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIRPPPYGSGGVRAYITGVT 129

Query: 140 QVNVEGKQELVEIIDVEKVLAEIIDYDTSISEEVLDKDIVNHFLGKKVLIVDDSGTARKQ 199
            V+      LV+++D+EKV+  I       +   L  +        ++L+VDDS  A +Q
Sbjct: 130 SVD----GTLVQVLDIEKVIHGIAPAQIETAPTELSMEDAEVLGNARILVVDDSQVALQQ 185

Query: 200 MKDTLEQLGITIIERKNGAQALALLKKWADEGKNPTDEILLMFTDAEMPEMDGYRLTSEV 259
              TL  LG+     ++  +A+  L     + +    +I L+ +D EM EMDGY LT  +
Sbjct: 186 SVHTLRNLGLQCHTARSAREAIDCLL----DLQGTAQQINLIVSDIEMSEMDGYALTRTL 241

Query: 260 RNDPRMSNLFIALNTSLSGSFNDAMVEKVGCDRFISKF 297
           R  P  S+L+I L+TSL  + N       G +  ++KF
Sbjct: 242 RETPDFSHLYILLHTSLDSAMNSEKARLAGANAVLTKF 279