Pairwise Alignments

Query, 319 a.a., Chemotaxis protein CheV from Alteromonas macleodii MIT1002

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  174 bits (441), Expect = 3e-48
 Identities = 98/296 (33%), Positives = 169/296 (57%), Gaps = 11/296 (3%)

Query: 23  LLMFQLGTRHIFAMNVFKIKEVINVPKLNIMPGSHHNLKGVMNYRGSSIPIIDLRQAIKM 82
           LL+F+L    +FA+   KI+E++   KL+ +P SH  + G    RG +IPIID+  A+  
Sbjct: 28  LLLFRLSHTQLFALGTLKIRELVPFSKLSAIPQSHPAILGAATVRGHTIPIIDMAAAVGY 87

Query: 83  RGAATQATAKN-VIITEYNRSVQGFIIGEVKNIVNTSWGTIQPPPSGIGKSNYLTAITQV 141
                +  A   +IIT+  R V GF++  +  I+  +W  I+ PP  +GK+ +LT +T+V
Sbjct: 88  APITPEECANAYIIITDCQRMVMGFLVRSIDKIIECNWRDIESPPDNLGKNAFLTGVTRV 147

Query: 142 NVEGKQELVEIIDVEKVLAEIIDYDTSISEEVLDKDIVNHFLGK-KVLIVDDSGTARKQM 200
           +     +LV+++DVE +L++I       +  +L  D+    L    +L+VDDS  ARKQ+
Sbjct: 148 D----DKLVQLLDVELLLSKIFPASPDTTRAILT-DVQREILKPLNILLVDDSMVARKQL 202

Query: 201 KDTLEQLGITIIERKNGAQALALLKKWADEGKNPTDEILLMFTDAEMPEMDGYRLTSEVR 260
            D L+ + I  +   +G  AL+++++ A EG+ P D   L+ +D EMP +DGY L  EV+
Sbjct: 203 SDALDSINIPYLVTSDGRDALSIMEEAAKEGR-PVD---LLVSDIEMPGLDGYELAFEVK 258

Query: 261 NDPRMSNLFIALNTSLSGSFNDAMVEKVGCDRFISKFQPDMLVDVAQQRLREYLSS 316
           N P +++ +I L+TSLS   + +   +VG +  ++KF    L+D   +  + + +S
Sbjct: 259 NTPALADAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELIDAMLRGAKRHQAS 314