Pairwise Alignments

Query, 783 a.a., Lon protease from Alteromonas macleodii MIT1002

Subject, 798 a.a., DNA-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score = 1056 bits (2732), Expect = 0.0
 Identities = 535/773 (69%), Positives = 644/773 (83%), Gaps = 4/773 (0%)

Query: 9   IEIPVLALRDVVVYPHMVIPLFVGREKSIRCLEAAMDNDKQIFLVAQKDAGVDEPEADDI 68
           IE+P+L LRDVVVYPHMVIPLFVGREKSI  LEAAM  DKQI L+AQ++   D+P  D +
Sbjct: 5   IELPLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGDKQILLLAQRNPADDDPGEDAL 64

Query: 69  YTVGTIATILQLLKLPDGTVKVLVEGSVRGEIESYKQSEPFFVANVDKLTDEEIDESEQE 128
           Y VGTIAT+LQLLKLPDGTVKVLVEG  RG +E + + +    A V  + + +  E E E
Sbjct: 65  YRVGTIATVLQLLKLPDGTVKVLVEGEQRGAVERFSEVDGHCRAEVSLIDEVDAPERESE 124

Query: 129 VLIRSAVSQFEGYVKLNKKIPPEVLTSLNGIEDAPRLADTMAAHMPLKLTEKQKVLEMQG 188
           V +RS +SQFE YV+L KK+P EVL+SLN I++  RL DTMAAHM LK+ +KQ++LE+  
Sbjct: 125 VFVRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHMALKIEQKQEILEIID 184

Query: 189 VNERLEYLMALMEGEIDLLQVEKKIRTRVKKQMEKSQREYYLNEQMKAIQKELGELDDAP 248
           ++ R+E+++AL++ EIDLLQVEK+IR RVKKQME+SQREYYLNEQMKAIQKELG+ ++  
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSEEGH 244

Query: 249 DEFEALSKKIADAKMPKEAEDKAKAELQKLKMMSPMSAEATVLRSYIEWLTNVPWNKRSP 308
           +E E L K+I  A +PK+A  KA+AEL KLK MSPMSAEATV+RSY++WL  VPW  +S 
Sbjct: 245 NEVEELKKRIDAAGLPKDALIKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVPWKAQSK 304

Query: 309 VKKDLSRAEGVLNEDHYGLEKVKERILEYLAVQQRVKKLKGPILCLVGPPGVGKTSLGQS 368
           V+ DL+RAE +L+ DHYGLE+VKERILEYLAVQ+RVKK++GP+LCLVGPPGVGKTSL +S
Sbjct: 305 VRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAES 364

Query: 369 IAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSLPGKLVQKMAKVGVKNPLFLLDEIDKM 428
           IA AT RK+VRMALGGVRDEAEIRGHRRTYIGS+PG+L+QKM KVGV+NPLFLLDEIDKM
Sbjct: 365 IAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKM 424

Query: 429 SSDMRGDPASALLEVLDPEQNNSFSDHYLEVDYDLSDVMFVATSNSMNIPGPLLDRMEVI 488
            SDMRGDPASALLEVLDPEQN++F+DHYLEVDYDLSDVMF+ TSNSMNIP  LLDRMEVI
Sbjct: 425 GSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVI 484

Query: 489 RLSGYTEDEKLNIAKNHLIGKQMERNGLKAKELEITDSAVIGMIRYYTREAGVRSLEREV 548
           RL GYTEDEK+NIA  +L  KQ++ NGLK  ELE    A+  +IRYYTREAGVR LER++
Sbjct: 485 RLPGYTEDEKINIAVKYLSPKQIQANGLKKGELEFDTEAIRDIIRYYTREAGVRGLERQI 544

Query: 549 SKVCRKAVKDILLKKSKDKVVVTQDNLKDYLGVQRFDYGKADKDNQIGQVTGLAWTQVGG 608
           +KVCRK VK+  ++K +  V VT + L+ +LGV++F YG A++ +Q+GQVTGLAWTQVGG
Sbjct: 545 AKVCRKTVKEHAMEK-RFSVKVTAEMLEHFLGVRKFRYGLAEQQDQVGQVTGLAWTQVGG 603

Query: 609 DLLTIETTSVPGKGKMTSTGSLGDVMQESIKAAMTVVRSRAEKLRINDDFYEKRDIHVHV 668
           +LLTIE   VPGKG++  TGSLGDVM ESI AA+TVVRSRA+ L I  DF+EKRD H+H+
Sbjct: 604 ELLTIEAAVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGIPLDFHEKRDTHIHM 663

Query: 669 PEGATPKDGPSAGIAMCTALVSSLTGNPVKCDVAMTGEITLRGEVLAIGGLKEKLLAAHR 728
           PEGATPKDGPSAG+ MCTALVS+LTG PV+ DVAMTGEITLRG+VLAIGGLKEKLLAAHR
Sbjct: 664 PEGATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHR 723

Query: 729 GGIKTVVIPKDNERDLEEIPDNVKKDLSIHPVKWIDEVLDIALQ---EPVESV 778
           GGIKTV+IP++N RDL+EIPDN+K+DL I PVKWIDEVL IALQ   EP+  V
Sbjct: 724 GGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQYAPEPLPDV 776