Pairwise Alignments

Query, 309 a.a., Chemotaxis protein MotB from Alteromonas macleodii MIT1002

Subject, 257 a.a., chemotaxis protein PomB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  104 bits (260), Expect = 2e-27
 Identities = 78/277 (28%), Positives = 126/277 (45%), Gaps = 59/277 (21%)

Query: 14  LPAWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNKIEVKDIPKGTS 73
           +P W+ TFAD+MSLL+CFF+LLLSF++ D+ KF+   GS++ AFGVQ +           
Sbjct: 28  IPEWIVTFADMMSLLLCFFILLLSFAKTDIAKFQAALGSIQDAFGVQRE----------- 76

Query: 74  VIAMEFRPGKPDPTPIESIQQQTNEMTQQMLEFQAGNEDSAGGRQKQRGEQRGGQSQQTA 133
                       P  IE+    T E                              SQ   
Sbjct: 77  -----------RPQDIEAAFSPTTE------------------------------SQVLI 95

Query: 134 TESSSSAEQSTDQSQMAELMKKVAQQLEKQILDGSVEMESLGQQLTIRIRENGSFSAGSA 193
           TE   +AEQ  +Q ++A ++K++  +  +   +  +  E  G  + +R+     F  GSA
Sbjct: 96  TEKLDAAEQ--EQLEVARMLKELVNEQAEIAKNAIISAEEGG--INLRVNSRALFEPGSA 151

Query: 194 FLQPQFQPVLRKIGTLLADVPGEIEISGHSDGQHIANELYRSNWDLSAQRAVAVAEAMRT 253
            L P  + V+R + T+L     ++ + GH+  +   +  + ++W+LSA RAV +   + +
Sbjct: 152 RLLPDGEAVIRLVHTILLKHKYDLIVEGHTGSREPFSSQFPTHWELSAARAVTLVRHILS 211

Query: 254 APGFDESRMSVVGKADTDPIVENATSPSDRAQNRRVE 290
             G    R+  VG  DT P+V       +   NRRVE
Sbjct: 212 L-GVSPRRLKAVGYGDTRPLVPENDDTGE--LNRRVE 245