Pairwise Alignments

Query, 279 a.a., Small-conductance mechanosensitive channel from Alteromonas macleodii MIT1002

Subject, 267 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

 Score =  157 bits (397), Expect = 2e-43
 Identities = 89/250 (35%), Positives = 140/250 (56%), Gaps = 3/250 (1%)

Query: 29  LLLAILTLVVGLWLVNRFVNLLDHRLGK-KDPTL-NKFLCGLISAVLKVMLLISVASMIG 86
           +L AIL LV+G + V    ++L++   K K P L ++F+  L SA+L V +++    + G
Sbjct: 17  ILKAILILVLGYFAVKIVSSILENGAKKSKIPELVSEFVIKLFSAILYVFVILLAVGVFG 76

Query: 87  IETTSFIAVVGAA-GLAIGLALQGSLANFAGGVLILIFKPFKVGDTIEAEGHLGSVSEIQ 145
           +ET   I  + A+ GL +G  LQ +L N   G+ I + KP    +T++  G  G + E+ 
Sbjct: 77  VETGPIILGLSASLGLILGFGLQDTLTNLTSGLWIAVMKPLDKDETVQIGGITGKIVEVG 136

Query: 146 ILYTVLNTFDNKRIVIPNGSLSNATLINVSVYDKRRCDMTFGIGYDDDIDKAKKVLQRLF 205
           I+ T L T DN  I IPN  +  + + N +  D RR D+  G+ Y +++D A      L 
Sbjct: 137 IMATKLLTPDNVVITIPNKLVWGSPITNYTRMDLRRVDVAVGVSYGENLDNALSKALELI 196

Query: 206 EEDERSLTDPAPRICVGGLGDNSVDLMFRPWVATDDLWPYYWDMQEKVKKAFDEEGISIP 265
            E  + L DPAP + V GLG++SVDL  R W  T D W    D+ + + + + +EGI IP
Sbjct: 197 SEHPKVLKDPAPAVVVTGLGESSVDLQLRAWTKTGDYWGVKGDLTKGIYEKYGKEGIEIP 256

Query: 266 YPQRDVHLYK 275
           +PQ D+H++K
Sbjct: 257 FPQMDIHVHK 266