Pairwise Alignments

Query, 478 a.a., Na(+)/dicarboxylate symporter from Alteromonas macleodii MIT1002

Subject, 592 a.a., Permease from Sinorhizobium meliloti 1021

 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 8/198 (4%)

Query: 42  QPSEIIFTAAITLFVAVLWVTEALPIPATSLLPFALFPLFGVLSHSEAASALGSHVIILL 101
           QP    F   I L +A +W      + A   L  A+F   G++ H  A S  G  ++I++
Sbjct: 3   QPQAFAFAILIGLMIAFIWGRLRYDLIAVLALLAAVFT--GIVPHKVAFSGFGDDIVIIV 60

Query: 102 MAAFMLSKGLERANLHKRFAIYML-RITGSGSPLKLVLGFMLTTAVLSMWISNTATILMM 160
            +A ++S  +ER+ + + F   +  R+T     + +++       VLS++I N   + MM
Sbjct: 61  ASALVVSAAVERSGVIEAFLHRVAPRVTSVRDQVVILVA---AVTVLSVFIKNIGALAMM 117

Query: 161 LPMAIAIINAVDNPRFGVALILGIAYSASLGGVGTPIGTPPNIIFMSVYEETQGIEYSFI 220
           +P+A  +  A  +     + ++ +A+ + LGG+ T +GT PNI+   + EE  G  +S  
Sbjct: 118 IPVAFQM--ARRSKASPSSFLMPMAFGSLLGGLITLVGTSPNIVVSRMREELTGQPFSMF 175

Query: 221 DWMKTGVPIVILGVPIMA 238
           D+   G+ I   GV  +A
Sbjct: 176 DFTPVGIGIAAAGVVFLA 193



 Score = 55.5 bits (132), Expect = 5e-12
 Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 15/206 (7%)

Query: 40  IDQPSEIIFTAAITLFVAVLWVTEALPIPATSLLPFALFPLFGVLSHSEAASALGSHVII 99
           +  P E +    I            LP+         L  LFG LS  EA  A+   ++I
Sbjct: 393 LGNPRERLMPVLILAGAMAFTALGVLPVATAFFAAAVLTVLFGALSLREAYEAVDWPIVI 452

Query: 100 LLMAAFMLSKGLERANLHKRFAIYMLRITGSGSPLKLVLGFMLTTAVLSMWISNTATILM 159
           +L A   +S+ +         A  + ++ G+      +   M+     + +++N AT+L+
Sbjct: 453 MLGALIPVSESIRTTGGADLIAGALAQLAGALPVFGALAMIMVVAMAATPFLNNAATVLV 512

Query: 160 MLPMAIAIINAVD-NPRFGVALILGIAYSASLGGVGTPIGTPPNIIFMSVYEETQGIEYS 218
           + P+A+ + + +  NP    A ++ +A  A+   + TP+G   N + +          Y 
Sbjct: 513 VAPIAVTLAHRLGYNPD---AFLMAVAVGAACDFL-TPVGHQCNTLVLGPG------GYR 562

Query: 219 FIDWMKTGVP----IVILGVPIMALW 240
           F D+ K G+P    +V+LGVP++ L+
Sbjct: 563 FGDYWKLGLPLSCIVVVLGVPLILLF 588



 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 3/144 (2%)

Query: 335 IPWGMLLLFAGGICIAKAFMSSGLSVLMGTWLTGLS-TLPVLLLVLGICLFVTFLTEITS 393
           + W ++++    I ++++  ++G + L+   L  L+  LPV   +  I +     T   +
Sbjct: 446 VDWPIVIMLGALIPVSESIRTTGGADLIAGALAQLAGALPVFGALAMIMVVAMAATPFLN 505

Query: 394 NTATSTLLMPILAAAGMAVGVDPKLLMIPAAISASCAFMLPVATAPNAIAYSTEKFDIKT 453
           N AT  ++ PI       +G +P   ++  A+ A+C F+ PV    N +      +    
Sbjct: 506 NAATVLVVAPIAVTLAHRLGYNPDAFLMAVAVGAACDFLTPVGHQCNTLVLGPGGYRFGD 565

Query: 454 MAREGVVLNVLVALVVTGVCYVTL 477
             + G+ L+ +V  VV GV  + L
Sbjct: 566 YWKLGLPLSCIV--VVLGVPLILL 587