Pairwise Alignments

Query, 452 a.a., tyrosine recombinase XerD from Alteromonas macleodii MIT1002

Subject, 566 a.a., Phage integrase (NCBI) from Rhodospirillum rubrum S1H

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 76/303 (25%), Positives = 129/303 (42%), Gaps = 26/303 (8%)

Query: 133 PSEFQPTIKEV-------AEEWSQWAEDKKNAKY-VSAMATYVKALVVFLGRDELPANVS 184
           P  F+P +  V       +E + +W  ++K AK  +    T ++      G D+   +++
Sbjct: 233 PPLFKPAVTAVPANSLRLSEVFERWKVERKPAKRSLMEWDTAIRRFTALYG-DKPVESIT 291

Query: 185 SGQAQMFIDGLLSSGKSANTVTHYKSKLQELWRWALSREKAQGGNPWLNCKVEASKKKSK 244
             +   F D LL  GK+A TV      ++   ++A+   K    NP    KV A K+ S+
Sbjct: 292 KAEVVEFKDSLLQQGKAAATVLKQVGAIKSTLQYAVDNGKLSV-NPATGVKV-AGKRASE 349

Query: 245 PEHYRNFTDEELTHILAETDFKKLNTSTWAYPYALHMLPRLLPFLGTRLSELALAQKEQF 304
                 +  E+L  I +   F   +        A   LP L  F G RL+E+        
Sbjct: 350 VRRLP-YDAEDLKAIFSSPVFTCGDRPLAGSGEASFWLPLLALFTGARLNEIGQILVSDV 408

Query: 305 VDVDGRLFFEVR---EGKTVN---AQRIVPVSPAIKPL-VLQVLDRAGDSPWLFPEIGEA 357
            ++DG  + ++    EGK++    ++R VP+ P I  L  L  + + G+S      + + 
Sbjct: 409 RELDGIHYLDLNTEGEGKSLKNEGSRRKVPLHPEIIRLGFLDYVRKQGESLGSDSRVFDK 468

Query: 358 VIGAEGAANSI-SSKFGKITKGFAKVEGYKTG---LHSFRGHFATALEQVGCPEDIATKL 413
           +   E  +N + ++ F K    +A+  G   G    HSFR  F  A  +   P+DI   L
Sbjct: 469 L---EPNSNGVLTANFSKWWGRYARENGIAKGQKVFHSFRHSFKDACRESSLPQDIHDAL 525

Query: 414 AGH 416
            GH
Sbjct: 526 TGH 528