Pairwise Alignments

Query, 292 a.a., hypothetical protein from Alteromonas macleodii MIT1002

Subject, 225 a.a., HNH endonuclease from Vibrio cholerae E7946 ATCC 55056

 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 18/129 (13%)

Query: 8   SRNIPLAIQREVRQRCGFGCVICG---MPLYEYEHMEEWAVVKRHVAEEITLLCDQHHRE 64
           SR+IP  +++++ Q     C  CG   +  +E  H++ +  VK+H    + LLC   H +
Sbjct: 3   SRHIPERLKKKIYQEANMTCPNCGERDVSTFEIHHIQPFVDVKKHEERNLILLCSNCHSK 62

Query: 65  KTNGLLPK-EVVREADQNPHNLKAGVSKPYDLHFQGEKAEVSVGGNVFTCHD-KGHGTAM 122
            T G L + EV+R        LK G+     +     +++ ++  NV T    K HG   
Sbjct: 63  ATVGELTEIEVLR--------LKVGL-----ISSSSGQSKETMPSNVITLDSVKNHGVIA 109

Query: 123 APISVDGVP 131
             ++++  P
Sbjct: 110 NQVTLNNSP 118