Pairwise Alignments

Query, 627 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

Subject, 1003 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  290 bits (741), Expect = 3e-82
 Identities = 160/428 (37%), Positives = 248/428 (57%), Gaps = 1/428 (0%)

Query: 195 IQHLAHHDPLTNLPNRILGERLFNEKLRESEEKGLQLALLFIDLDNFKPVNDALGHAAGD 254
           I+ +  HD LT LPNR L E    + +  ++     + ++F+DLD FK VND+LGH+AGD
Sbjct: 542 IRFMGDHDALTGLPNRTLLEDRLKQAMLYAQRYNRLVTVVFLDLDKFKLVNDSLGHSAGD 601

Query: 255 RFLQKISQTITDHLSTKQSLIRFGGDEF-IVLAPEISDKSEIDDLCKNLITWCSNEFEVL 313
             L+ ++Q +   +    +++R GGDEF I+L  + SD   +  +   +        ++ 
Sbjct: 602 ELLKTVAQRMLGCVRRTDTVVRLGGDEFVIILFDQPSDLDGVTPVLHKIQEAILRPIQLS 661

Query: 314 QTKVVVSGSIGVAQAPYDGIKFKQLCRKADIAMYEAKRNGRNRYEYYDVRFDEENDEKFT 373
              + V+ S+G+A  P DG     L   AD AMY AK  GRN +++Y    + +   K  
Sbjct: 662 GHTLHVTCSMGLATYPTDGTDTDTLLSNADAAMYRAKELGRNSFQFYTSEMNNKVQGKLA 721

Query: 374 LIQRLRPAVQANEFEVYYQPLIDLASNEVQAVEALLRWPQKDGSMIFPDKFIPLAESSGL 433
           +   LR A+  +EF + YQP +DL S ++  VEAL+RW   +  M+ P KFIP AE +GL
Sbjct: 722 MQDGLRSALNNDEFLLLYQPQVDLQSGQIIGVEALIRWQHPELGMVSPIKFIPQAEETGL 781

Query: 434 IIPLGAWVLNQACEFCAKQHENGHTNLTVAVNLSFAQFKDGTLPAVVEQALQNSQLAPQF 493
           I+P+G WV++ AC       + G   +T++VN+S  QF +  L   V  ALQ S L P +
Sbjct: 782 IVPIGDWVIHSACRQNKAWQDAGWPPITMSVNISARQFIERDLIDRVMHALQESGLDPMY 841

Query: 494 LELELTETILADENGTTGEQLEAIKSLGVHFAIDDFGTGYSNLNYLQTFSARKLKIDRIF 553
           LELELTE+++  +      +++A++++G+  +IDDFGTGYS+L  L++F   +LKID+ F
Sbjct: 842 LELELTESLIMQDLQQAISKMKALQAMGISLSIDDFGTGYSSLAALKSFPIARLKIDQSF 901

Query: 554 INTLGIGENDAPLVAAIISIADSLGMKAVAEGIESKPALEKLIKMGCDLGQGYYWSKPLP 613
           +  L   END  +  A+IS+   L +K +AEG+E++     L   GCD  QGY++SK + 
Sbjct: 902 VRDLPDNENDKAIATAVISLGHKLNLKVIAEGVETEEQQTFLRDNGCDEIQGYFFSKAVS 961

Query: 614 APEIERLL 621
           A EI  LL
Sbjct: 962 AQEIGLLL 969