Pairwise Alignments

Query, 627 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

Subject, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  302 bits (774), Expect = 3e-86
 Identities = 175/457 (38%), Positives = 262/457 (57%), Gaps = 13/457 (2%)

Query: 169 ILIQDIRRLMQSLQQEVSKVEQNRAH---IQHLAHHDPLTNLPNRILGERLFNEKLRESE 225
           I ++D R +   +   V+ + + + H   +++LAHHD LT LPNR+L      + L  ++
Sbjct: 174 IAVRDARGVATLMAGSVTDITERKLHEERMRYLAHHDQLTGLPNRLLLADRLPQALTRAK 233

Query: 226 EKGLQLALLFIDLDNFKPVNDALGHAAGDRFLQKISQTITDHLSTKQSLIRFGGDEFIVL 285
            +  + A+LF+DLD FK +ND+LGH  GDR LQ +++ + + L    +++R GGDEFIV+
Sbjct: 234 RQQSRAAVLFVDLDRFKNINDSLGHNQGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVI 293

Query: 286 APEISDKSEIDDLCKNLITWCSNEFEVLQTKVVVSGSIGVAQAPYDGIKFKQLCRKADIA 345
             ++    +   +   L+   ++ +        ++ SIG+A  P DG     L R AD A
Sbjct: 294 LEDLQLPEQAGQIGAKLLETLASPYREDGYDFFLTASIGIALYPDDGDDADTLLRNADTA 353

Query: 346 MYEAKRNGRNRYEYYDVRFDEENDEKFTLIQRLRPAVQANEFEVYYQPLIDLASNEVQAV 405
           MYE K +G N   +Y  R +E    + +L   LR A++ +E ++YYQP IDLAS  +   
Sbjct: 354 MYEGKSSGGNTVRFYTGRMNERLQSRVSLENGLRRALERDELQLYYQPQIDLASGRLLGA 413

Query: 406 EALLRWPQKDGSMIFPDKFIPLAESSGLIIPLGAWVLNQACEFCAKQHEN-------GHT 458
           EALLRW    G +I PD+FIP+AE +GLI+P+G WVL+ A    A    +       G T
Sbjct: 414 EALLRW-NDGGRLIPPDQFIPVAEETGLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGAT 472

Query: 459 NLTVAVNLSFAQFKDGTLPAVVEQALQNSQLAPQFLELELTETILADENGTTGEQLEAIK 518
              +A+NLS  QF  G +   V   L+   L P  +ELE+TE++L  +     E+L  ++
Sbjct: 473 PPRIAINLSARQFWGGGIAEHVLLRLEREGLPPSTIELEVTESVLLRQEADCLEELRRLR 532

Query: 519 SLGVHFAIDDFGTGYSNLNYLQTFSARKLKIDRIFINTLGIGEND--APLVAAIISIADS 576
             GV  A+DDFGTGYS+L+YL+      LKID+ FI  L   ++   A +V AI+++A +
Sbjct: 533 EAGVGLALDDFGTGYSSLSYLRLLPIDTLKIDKSFIFPLDEDQDGEAAAIVRAILAMAHT 592

Query: 577 LGMKAVAEGIESKPALEKLIKMGCDLGQGYYWSKPLP 613
           LG K VAEG+E +  LE L  MGCD  QGY  S+PLP
Sbjct: 593 LGHKVVAEGVERQTQLELLRTMGCDSFQGYLESRPLP 629