Pairwise Alignments

Query, 639 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

Subject, 770 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (515), Expect = 3e-56
 Identities = 124/351 (35%), Positives = 198/351 (56%), Gaps = 6/351 (1%)

Query: 284 VLVVVLKIVLASVGILITIWLLVKYIVGKPLEEFIGVVNNLSSGEGDLTFRFQASRSDEF 343
           ++ V++ IV+ +V   +  W++   I  KP+ + I  +  +S  + DLT R     SDE 
Sbjct: 417 IMKVLIAIVIGAVIATLAAWMVGNGI-SKPIRDSISQIQRMSR-DNDLTVRLSEQGSDEI 474

Query: 344 GTMARAFNGLLSQLQDTLQSVDEATDHMLAKSERLNATALQSKDTVSQLSRETESINNAI 403
             +A+A N +LS LQDT+      TD + + ++ +      ++++VS+    T+S+  A+
Sbjct: 475 RQLAQALNRMLSHLQDTICQFAHTTDKLNSHTQTITHNMTGTRNSVSEQHERTDSVVTAV 534

Query: 404 SLMQQNAQTVSSTIRSSSEAAHAADQDTRNSVSVLAQTIKDIQSQASDVDASVQVITELA 463
           + M  +   VS   + ++     A+Q     VSV  +  +D+ S    + ++V+ I  L 
Sbjct: 535 NEMSASITEVSEFAQRAATFVQEANQKGHGGVSVGNELARDMTSINQQMASAVEAIARLN 594

Query: 464 QASEEISGVMEVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSSTE 523
             S+ I+ V++VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA++TQ+STE
Sbjct: 595 HESQSIASVLDVIQAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAAKTQTSTE 654

Query: 524 EIRNMIERLQQGSRVASEKMQQNKETAYKTVDTTKHAGDSLKQALDAVARITTLNRDAAT 583
           EIR  I+RLQ+ ++     +++   T  + V T     D LKQ +D +  +  +N   AT
Sbjct: 655 EIRTKIDRLQKETQSVVNCIEEANNTVVRGVATCHSNTDMLKQIVDMLNELNEMNIQIAT 714

Query: 584 MAEGQTEVANDVNKGVSSIQQVGNANTTYAKEVVDNCEALVQQVKQMQMQL 634
             E Q  V  ++N  ++SI  V  + T    EV     A+V ++    M+L
Sbjct: 715 ATEQQRGVTEEINANITSISDVSASVTVQVGEV----NAIVNELSDEAMEL 761