Pairwise Alignments

Query, 639 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (544), Expect = 1e-59
 Identities = 135/416 (32%), Positives = 219/416 (52%), Gaps = 15/416 (3%)

Query: 224 LRDAKGNIRMHSAHVNDRQVANALQP--NDDWVVEVVPFSPWGYDIILVASTSEKSAMVR 281
           L ++K N+  H   +N +  A +      +DW V VV      Y  +          + R
Sbjct: 220 LGESKINVDTHQVIINGKPYAVSFSDVEGEDWYVGVVIDEEIAYAAL--------DELRR 271

Query: 282 SSVLVVVLKIVLASVGILITIWLLVKYIVGKPLEEFIGVVNNLSSGEGDLTFRFQASRSD 341
           S+++  V+ +V++     + + L +  ++ KPL+     + N++SGEGDLT R   +  +
Sbjct: 272 STLIFTVIALVIS-----VFVLLFIVRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDE 326

Query: 342 EFGTMARAFNGLLSQLQDTLQSVDEATDHMLAKSERLNATALQSKDTVSQLSRETESINN 401
           EF  +A  FN     LQ  L         +L  SE  + T  QS + +     E E +  
Sbjct: 327 EFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLAT 386

Query: 402 AISLMQQNAQTVSSTIRSSSEAAHAADQDTRNSVSVLAQTIKDIQSQASDVDASVQVITE 461
           A+  M   +  V++  + ++ AA  AD        V+ +T K I + ++ +DA+V  +  
Sbjct: 387 AMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKV 446

Query: 462 LAQASEEISGVMEVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSS 521
           L  A+  I  V++VI +IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S
Sbjct: 447 LESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQS 506

Query: 522 TEEIRNMIERLQQGSRVASEKMQQNKETAYKTVDTTKHAGDSLKQALDAVARITTLNRDA 581
           T EIRNMIE+LQ G+   +  M  +K+TA   V+  + A ++L++   A+ +I+ +N   
Sbjct: 507 TTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQI 566

Query: 582 ATMAEGQTEVANDVNKGVSSIQQVGNANTTYAKEVVDNCEALVQQVKQMQMQLLRY 637
           A+ AE Q+ VA ++N     I+ + +     A E   + +   + +++    L ++
Sbjct: 567 ASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQTENIREQDAILNKF 622