Pairwise Alignments

Query, 639 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (544), Expect = 1e-59
 Identities = 151/494 (30%), Positives = 247/494 (50%), Gaps = 28/494 (5%)

Query: 154 DGKAIKKINQQEAYYGAVDILGSPYLTGYEPMFNSSGDVVGIWYVGYSADLNVLEQAIKQ 213
           D K  +K+   E Y   VDI     +           + VG  +  Y  +L  L Q +  
Sbjct: 130 DAKRERKLVVTEPY---VDISTKKIIISIGTPVYQQSNFVGAMF--YDVELTQLAQLVNS 184

Query: 214 SHVLKEGFVALRDAKGNIRMHSAHVNDRQVANALQPNDD--------------WVVEVVP 259
            ++   G++ +    G    H    N+ +  +   PN D              ++V+   
Sbjct: 185 VNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYYLVKFAQ 244

Query: 260 FSPWGYDIILVASTSEKSAMV----RSSVLVVVLKIVLASVGILITIWLLVKYIVGKPLE 315
                + I  V   S   AMV     SS++  V+ ++L+ +G+   I +L+K     PL 
Sbjct: 245 VPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMK-----PLG 299

Query: 316 EFIGVVNNLSSGEGDLTFRFQASRSDEFGTMARAFNGLLSQLQDTLQSVDEATDHMLAKS 375
                + +++SG+GDLT R   +   EF  +A+ FN     LQ  +Q +      ++  +
Sbjct: 300 ALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGT 359

Query: 376 ERLNATALQSKDTVSQLSRETESINNAISLMQQNAQTVSSTIRSSSEAAHAADQDTRNSV 435
           E+    A +S   ++Q  +E E +  A+  M   A  V++  + ++ AAH AD+ +++  
Sbjct: 360 EQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGS 419

Query: 436 SVLAQTIKDIQSQASDVDASVQVITELAQASEEISGVMEVIRNIAEQTNLLALNAAIEAA 495
            V++ T + I + ++ ++ +V+ +  L  A+  I  +++VI +IA+QTNLLALNAAIEAA
Sbjct: 420 KVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAA 479

Query: 496 RAGEQGRGFAVVADEVRSLASRTQSSTEEIRNMIERLQQGSRVASEKMQQNKETAYKTVD 555
           RAGE GRGFAVVADEVR+LA RTQ ST EIRNMIE+LQ G+   S  M ++K TA   V 
Sbjct: 480 RAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQ 539

Query: 556 TTKHAGDSLKQALDAVARITTLNRDAATMAEGQTEVANDVNKGVSSIQQVGNANTTYAKE 615
             + A +SL++   A+ RI+ +N   A+ AE Q+ VA ++N     I+ +       AK 
Sbjct: 540 KAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKS 599

Query: 616 VVDNCEALVQQVKQ 629
                E   + V++
Sbjct: 600 ASMAMEVQTENVRE 613