Pairwise Alignments

Query, 344 a.a., putative permease from Alteromonas macleodii MIT1002

Subject, 458 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 27/127 (21%), Positives = 65/127 (51%), Gaps = 6/127 (4%)

Query: 218 EAWSDFIDVLPYLLIGIAIGSVIYG------FMPTDLLEQYAGPDNPFAIPVAAVIGVPL 271
           ++W     ++P LL G+ I  ++ G       +P++ +    G ++  +  +A+V+G  +
Sbjct: 326 QSWDFTKQIMPLLLGGVLIAGMLLGRPGHEGLIPSEWVVWAVGDNSFTSTLLASVLGAFM 385

Query: 272 YIRAEAVIPLAAALMAKGVGAGTVLALIIGSAGASLTELILLRSLFTLKLLAAFLAVIFA 331
           Y      +P+   L+  G+G G  LA+++     SL  ++++R++   +    + +++  
Sbjct: 386 YFSTLTEVPIVEGLLGAGMGKGPALAILLAGPALSLPNMLVIRTVLGTQKTIVYCSLVVV 445

Query: 332 MAMIAGY 338
           MA ++GY
Sbjct: 446 MATLSGY 452



 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 7/106 (6%)

Query: 31  GVLQRHIPPSKVEALLTSSGKRGYFLAAGLGAITPFCSCSTIPMLKGLIRARAGFGPMMV 90
           G + +H+ P+  + +        + +A+  G +   CSC+ +P+  G+ R  AG G  + 
Sbjct: 97  GAVMKHLGPASPKPV-------AFGVASIAGTLLAVCSCTVLPLFGGIYRRGAGLGAAIA 149

Query: 91  FLFSSPLLNPIVVGLLVATFGWTLTAIYVLAALVVAVGAGWLLHTL 136
           FL+S P +N + + +     G  L     + A+V A+  G ++H L
Sbjct: 150 FLYSGPAINVMAIVVTAKVLGAELGIARAVGAIVFALVIGAIMHLL 195



 Score = 43.9 bits (102), Expect = 8e-09
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 6/133 (4%)

Query: 6   QEALGMFAFLAIELSVLFIGISLLVGVL------QRHIPPSKVEALLTSSGKRGYFLAAG 59
           QE +G       ++  L +G  L+ G+L      +  IP   V   +  +      LA+ 
Sbjct: 321 QEWVGQSWDFTKQIMPLLLGGVLIAGMLLGRPGHEGLIPSEWVVWAVGDNSFTSTLLASV 380

Query: 60  LGAITPFCSCSTIPMLKGLIRARAGFGPMMVFLFSSPLLNPIVVGLLVATFGWTLTAIYV 119
           LGA   F + + +P+++GL+ A  G GP +  L + P L+   + ++    G   T +Y 
Sbjct: 381 LGAFMYFSTLTEVPIVEGLLGAGMGKGPALAILLAGPALSLPNMLVIRTVLGTQKTIVYC 440

Query: 120 LAALVVAVGAGWL 132
              +V+A  +G+L
Sbjct: 441 SLVVVMATLSGYL 453



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 24/121 (19%), Positives = 52/121 (42%), Gaps = 2/121 (1%)

Query: 226 VLPYLLIGIAIGSVIYGFMPTDLLEQYAGPDNP--FAIPVAAVIGVPLYIRAEAVIPLAA 283
           V+  LL    I   +  ++    + ++ GP +P   A  VA++ G  L + +  V+PL  
Sbjct: 76  VILCLLPAFVIAGAMAVYISQGAVMKHLGPASPKPVAFGVASIAGTLLAVCSCTVLPLFG 135

Query: 284 ALMAKGVGAGTVLALIIGSAGASLTELILLRSLFTLKLLAAFLAVIFAMAMIAGYATYLF 343
            +  +G G G  +A +      ++  +++   +   +L  A        A++ G   +L 
Sbjct: 136 GIYRRGAGLGAAIAFLYSGPAINVMAIVVTAKVLGAELGIARAVGAIVFALVIGAIMHLL 195

Query: 344 F 344
           +
Sbjct: 196 Y 196