Pairwise Alignments

Query, 161 a.a., Neu5Ac permease from Alteromonas macleodii MIT1002

Subject, 175 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Pseudomonas fluorescens FW300-N2E2

 Score = 56.6 bits (135), Expect = 2e-13
 Identities = 29/130 (22%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 17  IAMVSILLTVIWQVVSRYVLKDPASVTEELSRFILIWIGILGAAYAYRQNAHLGFNLIVE 76
           ++++++ L + W V +RYVL   +S  E  +  ++I    +GAA +YR  +H+  +++  
Sbjct: 22  LSVLAVALMIPWGVFARYVLGSGSSWPEPTAILLMIVFTFIGAAASYRSGSHMAVDMVTS 81

Query: 77  RQSRKVKRLLLTCVEVIVIIFCVLVMVYGGAELVSLTLELEQISAALGVKMGFIYSVLPL 136
           R     + +     ++++   C+ + V+G    + +T   + +SA   +++G  Y  +P+
Sbjct: 82  RLPSHWRTVASVFTQLLMAAVCIFMTVWGAK--LCMTTWNQFMSAIPTLRVGITYMPIPI 139

Query: 137 SGGLIIAYAL 146
            G L + + L
Sbjct: 140 GGFLTLIFVL 149