Pairwise Alignments

Query, 283 a.a., putative HTH-type transcriptional regulator YbbH from Alteromonas macleodii MIT1002

Subject, 278 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 3e-24
 Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 6/250 (2%)

Query: 2   NILEKITQNQAAFSKSEKKVAEVILANPQTAIHSSIATLAKMSDVSEPTVNRFCRRLDTK 61
           N++ ++  N    SK  + VA+ +L N     + +I  LA  +  SE TV R CR L  K
Sbjct: 6   NLMVRLRSNTEPLSKKLRVVADYVLENAHEVQYQTITDLAFNTKTSEATVVRLCRDLGYK 65

Query: 62  GFPDFKLHLAQSLANGTPYVNRHVDENDSPDEYTNKIFESTMASLEVARQSVDVNVVNRV 121
           G+ DF++ LA  L+         +D      +      +S + SL    + +D   +NR+
Sbjct: 66  GYSDFRMALAVDLSQSANQSQPKMD-----GDICEVSAQSAVDSLMDTAKLIDRAALNRI 120

Query: 122 VDLLTQAQKISFFGLGASASVAHDALNKFFRFNVPVVYFEDILMQRMSCMNCSDGDVVVL 181
            +L+  A+ I   G+GAS+ V      +  R     + +ED  +  MS      GD    
Sbjct: 121 CELVHGAKFIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFA 180

Query: 182 ISHTGRTKSLVEIAQIARMNDATVVGITS-ADSPLAQECSYVLSLEVPEDTDMYMPMASR 240
           IS +G TK +V  A  A      VV +T+ + SPL+     +L    PE        +S+
Sbjct: 181 ISSSGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGGAFSSK 240

Query: 241 IAQLTLIDVL 250
           +  L L+DVL
Sbjct: 241 VGALLLVDVL 250