Pairwise Alignments

Query, 283 a.a., putative HTH-type transcriptional regulator YbbH from Alteromonas macleodii MIT1002

Subject, 282 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 64/282 (22%), Positives = 136/282 (48%), Gaps = 5/282 (1%)

Query: 1   MNILEKITQNQAAFSKSEKKVAEVILANPQTAIHSSIATLAKMSDVSEPTVNRFCRRLDT 60
           M++L++I   +   S+S +++ + +LAN   A   +   LA  ++VS+ ++ +F +RL  
Sbjct: 1   MSVLQRIVSRRTQLSESGRQIGDWVLANAAQAAAMTSQDLAAWANVSQSSIVKFTQRLGF 60

Query: 61  KGFPDFKLHLAQSLANGTPYVNRHVDENDSPDE----YTNKIFESTMASLEVARQSVDVN 116
           KG+ +FKL L + L      VN+ +  N   D+       K+ ++   ++     ++ ++
Sbjct: 61  KGYSEFKLALTEELGRKQVMVNQPLHSNILADDPVAVIAQKLVQTKTEAMFHTTNALRLD 120

Query: 117 VVNRVVDLLTQAQKISFFGLGASASVAHDALNKFFRFNVPVVYFEDILMQRMSCMNCSDG 176
             +  +  + QA ++   G+G SA VA D   K  +  +  +  +D  +Q  +       
Sbjct: 121 EFSEAISWIQQAVRVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQ 180

Query: 177 DVVVLISHTGRTKSLVEIAQIARMNDATVVGITSADSPLAQECSYVLSLEVPEDTD-MYM 235
           DV++ IS +G  + ++  A+ A+   A V+ +T+ +    +E + +    + ++T     
Sbjct: 181 DVLIAISFSGEKREILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSS 240

Query: 236 PMASRIAQLTLIDVLATGFTLRRGNKFRENLKRVKDTLRGSR 277
            +ASR AQ  L D++    T +R    R+ +  +   +R  R
Sbjct: 241 AIASRTAQNVLTDLIFLTLTQQRETSARQLIDDISSDIRQMR 282