Pairwise Alignments

Query, 367 a.a., Outer membrane protein assembly factor BamC precursor from Alteromonas macleodii MIT1002

Subject, 339 a.a., outer membrane protein assembly factor BamC from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (253), Expect = 2e-26
 Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 27/357 (7%)

Query: 7   IASSVAMVALAGCSSQ-IDRKTASGSYEYLKTKEQESLKVPSDLDAPAFSRDFVLPELGQ 65
           +  S+A++ L+ CSS    R+ A   ++YL+T E +   +P     P F  ++ +P   Q
Sbjct: 8   VLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGA-TPQFYPNYDIP---Q 63

Query: 66  EADSNLVGKSLMVRSPALVLPLVTGSHIEEGKSSATIWFDQVDDSQPLSQAIWNSLLSFL 125
            A    VG  + +R P  VL L+ G+  E      T+W  + D++Q     +W++ L  +
Sbjct: 64  GAFHGGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQK----VWDTALKMI 119

Query: 126 DEQGIGVDSFSPEEKVLVTDWMVITREVEGPWYSFIDEESEIGRRFEFSLDVKPHGRSAA 185
            E+ I +   +  + ++ TDW+         W S  DE+  IG R+  S+ V+ + R   
Sbjct: 120 AERKIPLRKQT--DSMVETDWV--------DWVSE-DEDVTIGSRYLMSM-VETNNRYG- 166

Query: 186 LTVELKDYMQTLGNDVVAEVSSMEERREEVEVLNQVVGHYEYQIQLAETRRIARIRQGIN 245
             + L  + +   N  V  VS+  + R    + N V   Y+  ++    RR   + + I 
Sbjct: 167 FKISLIGWRE---NGQVQTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIP 223

Query: 246 TEMGFNADGDAAYIVEAKYDVAWPRMLLVLRKLGFDVKDLDKSNGLLFVTYNGDQGSWWD 305
             MG +  G    I    YDV W R+  +L K+GF +++ ++S G +   Y      +W 
Sbjct: 224 ITMGSDRSGFPVIIARTPYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQ 283

Query: 306 GLFSSDKELLKKGDYRLKVARAGADRTSVTFMNNESVPFEANQVSDLYSAFAEVMSE 362
            +     E LK G Y       G +RTS+   ++   P     + ++    + V+ +
Sbjct: 284 QVGVKPIE-LKSGTYTFLFGDLG-NRTSINVTDSAGKPVNEALLKEMVPVLSAVVDK 338