Pairwise Alignments

Query, 313 a.a., site-specific tyrosine recombinase XerD from Alteromonas macleodii MIT1002

Subject, 315 a.a., integrase from Cupriavidus basilensis FW507-4G11

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 77/314 (24%), Positives = 125/314 (39%), Gaps = 57/314 (18%)

Query: 25  SYRTAIEHYERHWGG----------LLPATPTAIAQYLSHYADRLTS------------- 61
           SYR+A+    R+W G           LP  P  I Q++  +A R T              
Sbjct: 3   SYRSAL----RYWAGWFALRYGQPIALPLQPAVIIQFVVDHATRTTPQGPVSELPPAIDA 58

Query: 62  ----------------STLAHRLAVLAKWHHEYGFPDPTKAPLVKKVMKGIRATHAYQTK 105
                           +TL HRLAV+AK H      +P   P V++++   R   AY  +
Sbjct: 59  ALVARGLKARTGPPALATLMHRLAVIAKAHRLENLDNPCADPAVRELVA--RTRRAYAKR 116

Query: 106 QARPLQLEELKIIIQWLEESIKESKDYRKGLRLIRNKAILLLGFWRAF--RADELTNIHV 163
             RP +  +  +  + L   ++   D   GLR   ++A+LL   W +   R  E+    +
Sbjct: 117 GERPAR--KAALTREPLSRLLETCDDSLIGLR---DRALLLFA-WSSGGRRRSEVAGATL 170

Query: 164 EYVTMIPNKGMSLYFPTTKGDRDNKGVTYKVPALQKLCPVTAYQDWVTAAELSKGPLFVG 223
             +  +           +K ++    +      +      TA + W+ AA +  G +F  
Sbjct: 171 ANLRRLAPGEFVYQLGWSKTNQAGADLPDNAKPVIGAAG-TALEAWLKAAGIGDGAIFRR 229

Query: 224 IDRWGHFNHKSMTSNTIINIVRECASGAGLLHPDAFSSHSLRRGFASWADSNGWSLKELM 283
           + R GH   ++++   +  IVR+    AGL     FS+HSLR GF + A S    + E M
Sbjct: 230 VRRGGHVG-QALSDAAVRKIVRQRCEAAGL--EGDFSAHSLRSGFVTEAASRQVPMAEAM 286

Query: 284 EYVGWKDPKTALRY 297
              G     T +RY
Sbjct: 287 AMTGHTSVATLVRY 300