Pairwise Alignments

Query, 458 a.a., Multidrug export protein MepA from Alteromonas macleodii MIT1002

Subject, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 82.4 bits (202), Expect = 3e-20
 Identities = 91/405 (22%), Positives = 183/405 (45%), Gaps = 26/405 (6%)

Query: 19  FKQAFLSLIGLVALTTASLVDGIFIGQYVGASGLAAVSLLLPYITFLVALSLMLAIGGSV 78
           F+  +  L G+++L +  LVD  FIGQ +G   LAA    +P    ++ + + L I  + 
Sbjct: 15  FQMTWPMLFGVLSLMSFQLVDSAFIGQ-LGVLPLAAQGFTMPIQMVIIGIQVGLGIATTA 73

Query: 79  SIGTFMGKGDTKSASALFTQIIVVAVTLNIMLAVLSFVAEPFLFWLLHIPSDVVPLTREY 138
            I   +G G T+ A  L   +IV+      ++A++ ++    L  LL  P  V  +   Y
Sbjct: 74  VISRAIGAGKTEYAKQLGGLVIVIGGIGVALIALVLYLLRQPLLGLLGAPETVFAIIDHY 133

Query: 139 LSVIRWVFIFQFSTMVFYY--LVRADGYTKLATIALALGAVTNILLDALLVAYLGYGIKG 196
              + W+       M+++Y  + RA+G T L    + + +V N++LD + +     GI G
Sbjct: 134 W--LWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFDLGIDG 191

Query: 197 AAYATAAAQIVQLSVLLLYFADKNRAITFSTFNKPWRRIFRAVKNGLSEFTNEISVGVLF 256
           AA AT    I+   V +   A K     ++++   W+ +   +   L+   + +   +L 
Sbjct: 192 AAIAT----IIAFGVGIAIVAPKVAQRQWTSYQ--WQDL--NISQSLTALGHIMGPAMLS 243

Query: 257 LVI-------NTLLVINSGSIGVAAYSVVNYFIFLSIMLSFGIADALHLLVSYNRGASHT 309
            ++        T L+ + G+  VAA+++ + F F +++    +  +L  ++    GA   
Sbjct: 244 QLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKEI 303

Query: 310 SRVNAFLLIALTTAFIAGLILTVCLLWFNHVFVALFIEPSQQQATKY--AHTIILYVWPL 367
           + +    L+ +   F+ G  L + L+ +        +  S+ + ++    H +I+ +  L
Sbjct: 304 THIRQ--LVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPI-SL 360

Query: 368 FLVNGCNVLLSVFLTAIEKPLHSAFIALGRSILFPVSFLVLLSHF 412
             +  C +++SV   A+ K   +  I+  R   F +  L L +HF
Sbjct: 361 GALGICMLMVSV-ANALGKSYVALTISALRLFAFYLPCLWLGAHF 404