Pairwise Alignments

Query, 458 a.a., Multidrug export protein MepA from Alteromonas macleodii MIT1002

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  109 bits (272), Expect = 2e-28
 Identities = 108/393 (27%), Positives = 186/393 (47%), Gaps = 20/393 (5%)

Query: 6   KDAILHNPLLGTFFKQAFLSLIGLVALTTASLVDGIFIGQYVGASGLAAVSLLLPYITFL 65
           K  +L  P+     +     + GLVA+   +LVD  FI   +G   LAA+S   P +TF 
Sbjct: 16  KHGLLSAPIPLVLRQMTVPMIFGLVAILMFNLVDTFFIS-LLGTQALAAISYTFP-VTFA 73

Query: 66  V-ALSLMLAIGGSVSIGTFMGKGDTKSASALFTQIIVVAVTLNIMLAVLSFVAEPFLFWL 124
           V  +++ + +G S  IG  +G+GD + A+ + +  +++A+ L    + L  +    LF L
Sbjct: 74  VNCITMGIGVGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLL 133

Query: 125 LHIPSDVVPLTREYLSVIRWVFIFQFSTMVFYYLVRADGYTKLATIALALGAVTNILLDA 184
           L    +++PL +EY+ V           M     +RA G TK     + L  + N  LD 
Sbjct: 134 LGASHELIPLIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDP 193

Query: 185 LLVAYLG----YGIKGAAYATAAAQIVQL--SVLLLYFADKNRAI-TFSTFNKPWRRIFR 237
           LL+   G     GI+GAA A+A + +  L  S+ LL   +K  AI +       W++I +
Sbjct: 194 LLIFGYGPFPELGIQGAAIASAFSWLGALIGSLYLLIKREKLLAIPSLPHLRDDWQQILK 253

Query: 238 -AVKNGLSEFTNEISVGVLFLVINTLLVINSGSIGVAAYSVVNYFIFLSIMLSFGIADAL 296
                 LS   N IS  +L ++++     + G+  VAAY        + I++   +  AL
Sbjct: 254 IGTPAALSTAMNPISGALLMIMLS-----SHGTAAVAAYGATQRIESILILVLMSLTSAL 308

Query: 297 HLLVSYNRGASHTSRVNAFLLIALTTAFIAGLILTVCLLWFNHVFVALFIEPSQQQATKY 356
              ++ N GA + +R  A L ++L  + +  L++ + ++  +    ALF   SQ+QA + 
Sbjct: 309 TPFMAQNLGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALF---SQEQAVRD 365

Query: 357 AHTIILYVWPL-FLVNGCNVLLSVFLTAIEKPL 388
                L V P+ +   G  ++L   L A+ +PL
Sbjct: 366 LLWHYLLVVPVSYGFQGVVMMLVSALNALHQPL 398