Pairwise Alignments

Query, 491 a.a., Malate-2H(+)/Na(+)-lactate antiporter from Alteromonas macleodii MIT1002

Subject, 506 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score =  544 bits (1402), Expect = e-159
 Identities = 261/476 (54%), Positives = 359/476 (75%), Gaps = 1/476 (0%)

Query: 4   KEIKTPSLLDAMLPILALVIMMGSAVYLFADSSSYGPNQIALLLAMGLAAIIGMKNGYSW 63
           K  K P+LLDA++PI+ALV M+ ++VYLF+  SSYG NQIAL++A  +  +IG+KNGYSW
Sbjct: 21  KRHKQPTLLDALIPIIALVCMLTASVYLFSSDSSYGANQIALIMAACITLVIGVKNGYSW 80

Query: 64  KTIEKGIVDGISMSLGACLILLAVGSLIGTWMLAGTVPTLIYFGLELLNPSFFYAAACLI 123
           K +E GIV  +S++ GA LIL +VGSLIGTW+LAGTVPT+I++G+++LNP +FYAA+CL+
Sbjct: 81  KEMEAGIVKSVSLATGALLILFSVGSLIGTWILAGTVPTMIFYGMKILNPDYFYAASCLL 140

Query: 124 CAVVAMSIGSSWTTAATVGVALMGVSAGMEMSAAITAGAVVSGAYFGDKISPLSETTNLA 183
           CAVVA+SIGSSWT A T+G+AL+GV+  M +S  ITAGA++SGAYFGDK+SP+S+TTNLA
Sbjct: 141 CAVVALSIGSSWTVAGTLGIALIGVAGAMGLSVEITAGAIISGAYFGDKMSPMSDTTNLA 200

Query: 184 PAVAGTDLFEHIRYMLWTTIPSFVIALILFTVLGFSEVGEAKAERIEQMQLLLNESFDLG 243
           PAVAG++LF HIR+M+WTT PS ++ALI F  +G +    + A  +      +   +  G
Sbjct: 201 PAVAGSELFGHIRHMVWTTTPSILLALIGFLFIGLNSDSSSVATDLAATMARIETQYHPG 260

Query: 244 WHLLIPLVVLLTLAIKKMPAFPAVFIGALLGGVWAVVFQWDVVTSMASGDDSVNVGAL-K 302
            HLL+PL+V+L LA KK+PAFP V +G L G + A +FQ+D V    + D    + AL K
Sbjct: 261 LHLLLPLLVVLVLAYKKLPAFPTVILGTLAGAICAALFQFDGVIKFVNDDSLPTMVALVK 320

Query: 303 VVWTALFDGVSFSTPDENLNSLLSRGGMSSMLNTIWLIICAMSFGAVLERVGLLKRAVSA 362
            +W A+FDG + +T D+ L+SLLSRGGMSSM+NT+WLI+CAM+FG V+E+ GLL+R +  
Sbjct: 321 GIWVAMFDGYTANTGDKTLDSLLSRGGMSSMVNTVWLILCAMAFGGVMEKTGLLQRLLQG 380

Query: 363 ILIGAKSAGDMVSRTILTCFGTNLVTADQYISIVMPGRMYKEEFKKRGLDQLNLSRSLED 422
           +L   KS+G ++  T+ +C G NL+T DQ+I+I++PGRM K E++K GL  +NLSR+LED
Sbjct: 381 VLRLVKSSGSLIITTLASCIGANLITGDQFIAILLPGRMLKVEYEKHGLAPVNLSRALED 440

Query: 423 GGTLTSPLIPWNTCGAYMHSVLLVNPFDYVFYAFFNVINPILAVIYAYLGIKILRI 478
             T+TSPL+PWNTCGAYM S L V    Y+ +AFFN+I P ++  YAY  IKI R+
Sbjct: 441 SATITSPLVPWNTCGAYMASTLGVATIAYLPFAFFNLICPFVSAAYAYYDIKIERL 496