Pairwise Alignments

Query, 491 a.a., Malate-2H(+)/Na(+)-lactate antiporter from Alteromonas macleodii MIT1002

Subject, 507 a.a., hypothetical Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 17/184 (9%)

Query: 43  IALLLAMGLAAIIGMKNGYSWKTIEKGIVDGISMSLGACLILLAVGSLIGTWMLA----- 97
           ++ L+ +GL  + G       ++I K + D   ++ G  +I  A+  L+ TWM+      
Sbjct: 298 LSTLVTLGLLIMSG-------RSIGKLLGD---LAHGVRMIAFAIAILLCTWMIGAVIQD 347

Query: 98  -GTVPTLIYFGLELLNPSFFYAAACLICAVVAMSIGSSWTTAATVGVALMGVSAGMEMSA 156
            G    L  +    L+PS   A   L+CA++A + GSSW T A +      ++  M+ S 
Sbjct: 348 LGVASLLADWAKWYLSPSLLVAGMFLLCAIMAFATGSSWGTFAIMIPIGGEIAHNMDASL 407

Query: 157 AI-TAGAVVSGAYFGDKISPLSETTNLAPAVAGTDLFEHIRYMLWTTIPSFVIALILFTV 215
            +    AV++G+ FGD  SP+S+T+ L+   +G    +H+   L   + +   AL+ F +
Sbjct: 408 LLPVLSAVMAGSVFGDHCSPISDTSVLSATSSGCLPHDHVVTQLPFALIAAFAALVGFQL 467

Query: 216 LGFS 219
           +  S
Sbjct: 468 VNLS 471



 Score = 28.5 bits (62), Expect = 6e-04
 Identities = 29/134 (21%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 224 AKAERIEQMQLLLNESFDLGWHLLIPLVVLLTLAIKKMPAFPAVFIGALLGGVWAVVFQW 283
           A+  ++ QM +    S    W L IP++ LL  ++           G  L      V  W
Sbjct: 229 AEPSKVTQMDIAPPSSQGNPWLLAIPMLTLLCASV-----------GLTLWSGAQQVPAW 277

Query: 284 DVVTSMASGDDSVNVGALKVVWTALFDGVSFSTPDENLNSLLS--RGGMSSMLNTIWLII 341
           D+   +AS D    +    ++ T +  G+   +   ++  LL     G+  +   I +++
Sbjct: 278 DISAWLASADIGAAMRDACLLSTLVTLGLLIMS-GRSIGKLLGDLAHGVRMIAFAIAILL 336

Query: 342 CAMSFGAVLERVGL 355
           C    GAV++ +G+
Sbjct: 337 CTWMIGAVIQDLGV 350