Pairwise Alignments

Query, 234 a.a., Sensor protein SrrB from Alteromonas macleodii MIT1002

Subject, 438 a.a., two-component system sensor histidine kinase EnvZ from Vibrio cholerae E7946 ATCC 55056

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 22/226 (9%)

Query: 12  DFSSVLAAAVHDMKNSLFLLIQSIETLSDALSPHDEKAREQVASVHYEASRLNTNLVQVL 71
           D + ++A   HD++  L      I   ++ +SP D    E + S   E +++ +  +  L
Sbjct: 226 DRALLMAGISHDIRTPL----TRIRLATEMMSPEDSYLAESIISDTEECNQIISQFMDYL 281

Query: 72  SLYRAELESLPITVDESFIKDLVEDVVGSNALYVSQKNIDISIAIEDDLSWYLDSELIYL 131
                E       VD   + D+  DV  S   Y  Q   ++   +   L    +   I  
Sbjct: 282 KPVNREAFE---AVD---LNDIASDVASSEGGYEVQIETELQAGLAPALG---NPIAIKR 332

Query: 132 LLNDVIINAMRYGTSKIIVSA-KADENDFMTIKIEDDGRGYPEAMLTKSHEELCDFELSQ 190
            L+++++NA+RYG   + VS+    +   + + +ED+G G   + + K  E     + ++
Sbjct: 333 SLSNLVVNALRYGNGWVKVSSGMTADKKLVWLSVEDNGPGIDPSQVNKVFEPFTRGDTAR 392

Query: 191 GR--TGLGLFFAKLIANAHSQGDKVGSIALSNGGSLGGSVFEVKIP 234
           G   TGLGL   K I + H      G++++SN  S GG   ++  P
Sbjct: 393 GSEGTGLGLAIVKRIVSQHH-----GAVSVSN-RSQGGLRAQISFP 432