Pairwise Alignments

Query, 234 a.a., Sensor protein SrrB from Alteromonas macleodii MIT1002

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 21/231 (9%)

Query: 14  SSVLAAAVHDMKNSLFLLIQSIETLSD----ALSPHDEKAREQVASVHYEASRLNTNLVQ 69
           S ++A   H+++  L  +   +E + D    A++   +K  +          RL  +++ 
Sbjct: 414 SELIAVVSHELRTPLTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLD 473

Query: 70  VLSLYRAELESLPITVDESFIKDLVEDVVGSNALYVSQKNIDISIAIEDDLSWYLDSELI 129
           +  + R ELE     V+   ++ +V DV+       ++KNI ++  +E D++   D + I
Sbjct: 474 LSKIERGELEMYREKVN---LRSIVCDVIEYLKPLATEKNIKLNKEVE-DIAIEADKDRI 529

Query: 130 YLLLNDVIINAMRYG-TSKIIVSAKADENDFMTIKIEDDGRGYPEAMLTKSHEELCDFEL 188
             +L ++I NA+++   ++ I+ +   E++ + +K+ D G G P+  + K        + 
Sbjct: 530 TQVLTNLIENAIKFSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDS 589

Query: 189 S----QGRTGLGLFFAKLIANAHSQGDKVGSIALSNGGSLG-GSVFEVKIP 234
           S    +G +GLGL   K I  AH      GSI + +   LG GS F + +P
Sbjct: 590 STKRKKGGSGLGLAVCKSIVEAHK-----GSIWVES--ELGKGSTFHIILP 633