Pairwise Alignments

Query, 504 a.a., Proline permease from Alteromonas macleodii MIT1002

Subject, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

 Score =  145 bits (367), Expect = 3e-39
 Identities = 117/475 (24%), Positives = 212/475 (44%), Gaps = 46/475 (9%)

Query: 3   MESYLSLAVYFIAMLGIGLFAYR--QSTSDISGYILGGRQVSPQVTALSAGASDMSGWML 60
           M   L   +  I +L IG   Y+  + TS    Y++GGR++ P V A+S GA+ +S   +
Sbjct: 1   MNILLLNVIVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAI 60

Query: 61  MGLPGAMYLTGFDAVYIA-IGLVAGALANYLLVAPKLRVYTEVANDSLTVPEFFAKRFDT 119
           +G  G   L G   +++  + +  G    ++    + R      N +LT PE  AKRF++
Sbjct: 61  VGFGGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLN-ALTFPELLAKRFES 119

Query: 120 PNSSLRIVSAVIIVLFFTLYTSAGLVAGGKLFESAFSVDYQLGLFITLGVVVSYTLLGGF 179
               ++  S ++I     +Y +A L+   +  E+  ++ + + L +   ++  Y ++GG 
Sbjct: 120 --KFIQWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGL 177

Query: 180 LAVSLTDFVQGCIMFVALVLVPIVAF-------TEFDSVSQMTS-----------AAYQS 221
             V  TD  QG IMF  ++ +  + +       T   ++S M+            A + S
Sbjct: 178 KGVMYTDAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTS 237

Query: 222 VPNFSESLETLTIVGLLSSLGWGLGYFGQPHIIVRFMAIRSVNAIGTARNIGMSWMLVT- 280
           +P F   +    +  ++  LG G+G   QP +IVRFM ++S   +  A  IG  ++L+  
Sbjct: 238 MPTFGSPMWWTIVSSII--LGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIAT 295

Query: 281 ----IIGALAT-------GFVGIAYANQFGLAVDDPETIFIIFSQLLFHPLISGFLMAAI 329
               ++G L+        G + I           + ++I  ++             + ++
Sbjct: 296 GTAYVVGTLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSL 355

Query: 330 LAAIMSTISSQLLVSASSLTEDIYRVMVNKKSSTKALSEKQTVTIGRYGVAGVALVALLL 389
           LAA MSTISSQ     +S+  D+Y  +  KK          +V I R G+    ++A +L
Sbjct: 356 LAAAMSTISSQFHAQGTSIGRDVYETICGKKG-------LNSVIITRLGIIVAIVIAAIL 408

Query: 390 AMDASNTILSLVSNAWAGF-GAAFGPLVLFCLYKKDLTAKAAMAGMISGAVTVLF 443
                  I++  +  + G   AAF P     L+ K  T + A+AG+++G    LF
Sbjct: 409 GYILPGGIVARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLF 463