Pairwise Alignments

Query, 322 a.a., Inner membrane protein YrbG from Alteromonas macleodii MIT1002

Subject, 320 a.a., calcium/sodium antiporter from Methanococcus maripaludis S2

 Score =  157 bits (398), Expect = 2e-43
 Identities = 107/329 (32%), Positives = 175/329 (53%), Gaps = 32/329 (9%)

Query: 8   ILIGLPVLLWSAGKFVGGAASVANHFGVSPLLIGMLIIGFGTSAPEIIVSIFAAIQGNSG 67
           ++ G  +L + +  F+ G+  VA HF VS  +IG  I+ FGTS PEI+ S  AA+ G  G
Sbjct: 9   MIFGGILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSGYPG 68

Query: 68  IALGNAYGSNIANILLILGLTAIISPIAVKSEIIKKELPVLLGITFFAAWQVWDLNISKD 127
           +A+GNA GS IANI +ILG++ ++ P+ +K   I K   + L  T         L  +  
Sbjct: 69  LAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILLV----ILGYNGF 124

Query: 128 DAFSLLGLFVLLLSWSIYHGMKGDKDALADEYDEEINSNEGTVKTHVMWLIAGLLLLVAS 187
             F  L LF+ ++++ IY     + D      DEEI S+  T K  + +++ GLL ++  
Sbjct: 125 SRFDGLILFLFMITYVIYTIKTSESD------DEEIISDLTTKKASI-FIVVGLLAVILG 177

Query: 188 SRMLVWGAVEVATFFGVSDTIIGLTVIAIGTSLPELASSLMAVKKGEHDLAIGNVIGSNM 247
           S + + GA  +A +F V ++IIG +++A GTSLPELASS+ A K+    + +GNVIGSN+
Sbjct: 178 SDLFIEGAKGIAEYFNVPESIIGFSLVAFGTSLPELASSVAAAKRKLGSIVLGNVIGSNI 237

Query: 248 FNTLAVVGIAGTIQPM-TVGSEFLYRDVMVMFASTIALFIFCIG---IKRQ--------- 294
            NT   +  +  I  +     E +   +M +      L IF +    IK+          
Sbjct: 238 ANTCIALSFSAMIVDIPKYNVELMVNTIMAL------LIIFTMNREKIKKMLKFKNFRTD 291

Query: 295 --GRLNRLEGGAFVLAYAAYTYWLIQAAF 321
              +++R++G +++L Y  +  +L+   F
Sbjct: 292 YFSKIDRIDGISYILIYLIFLAYLLGYIF 320



 Score = 76.6 bits (187), Expect = 7e-19
 Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)

Query: 174 VMWLIAGLLLLVASSRMLVWGAVEVATFFGVSDTIIGLTVIAIGTSLPELASSLMAVKKG 233
           + ++I G +LL   S   + G+  VA  F VS+ +IG T++A GTSLPE+ +S  A   G
Sbjct: 6   ISYMIFGGILLAYGSDWFIEGSTRVAKHFNVSNFVIGATIVAFGTSLPEIVTSSGAALSG 65

Query: 234 EHDLAIGNVIGSNMFNTLAVVGIAGTIQPMTVGSEFLYRDVMVMFASTIALFIFCIGIKR 293
              LA+GN +GS + N   ++GI+  + P+ +    + ++  +   +TI L I  +G   
Sbjct: 66  YPGLAVGNAVGSCIANIGIILGISVLMYPLIIKKRAIIKNGNIYLIATILLVI--LGYNG 123

Query: 294 QGRLNRLEGGAFVLAYAAYT 313
             R + L    F++ Y  YT
Sbjct: 124 FSRFDGLILFLFMITYVIYT 143



 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 36/91 (39%), Positives = 54/91 (59%)

Query: 4   ASLAILIGLPVLLWSAGKFVGGAASVANHFGVSPLLIGMLIIGFGTSAPEIIVSIFAAIQ 63
           AS+ I++GL  ++  +  F+ GA  +A +F V   +IG  ++ FGTS PE+  S+ AA +
Sbjct: 163 ASIFIVVGLLAVILGSDLFIEGAKGIAEYFNVPESIIGFSLVAFGTSLPELASSVAAAKR 222

Query: 64  GNSGIALGNAYGSNIANILLILGLTAIISPI 94
               I LGN  GSNIAN  + L  +A+I  I
Sbjct: 223 KLGSIVLGNVIGSNIANTCIALSFSAMIVDI 253