Pairwise Alignments

Query, 671 a.a., Excinuclease ABC subunit B from Alteromonas macleodii MIT1002

Subject, 671 a.a., excinuclease ABC subunit B from Pseudomonas fluorescens SBW25-INTG

 Score =  911 bits (2355), Expect = 0.0
 Identities = 450/670 (67%), Positives = 562/670 (83%), Gaps = 6/670 (0%)

Query: 5   FELHSKYKPAGDQPKAIEALVDGLESGLAGQTLLGVTGSGKTFTMANVIKEVQRPTLILA 64
           F+L ++++PAGDQP+AI  +V+G+E+GLA QTLLGVTGSGKTF++ANVI ++ RPTL+LA
Sbjct: 4   FQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTLVLA 63

Query: 65  HNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDHIEQMRL 124
            NKTLAAQLYGE K FFPNNAVEYFVSYYDYYQPEAYVPS+DTFIEKDASINDHIEQMRL
Sbjct: 64  PNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRL 123

Query: 125 SATKALMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQYKRN 184
           SATKAL+ER+D +IV +VS IYGLG PE+Y+KM+LH+ +GD +DQR++LRRL  LQY RN
Sbjct: 124 SATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQYTRN 183

Query: 185 DLAFERGTFRVRGDVIDIFPADSEKQAVRVELFDDEIDKISLFDPLTGAVDKSVIRATVF 244
           D+ F R TFRVRGDVIDI+PA+S+ +A+R+ELFDDE++ +S FDPLTG V + + R T +
Sbjct: 184 DMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTFY 243

Query: 245 PKTHYVTPREKILNAIEHIKEELGDRKKQLQEANKLIEEQRISQRTQFDIEMMMELGYCS 304
           PK+HYVTPRE ++ AIE IK EL +R + L+  NKL+E QR+ QRT+FD+EM++ELGYC+
Sbjct: 244 PKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYCN 303

Query: 305 GIENYSRYLSGRAPGEPPPTLLDYFPADGLMFIDESHVTVSQVGAMYRGDRSRKETLVEF 364
           GIENYSRYLSGR  G PPPTL DY P D L+ IDESHV+V QVGAMY+GDRSRKETLVE+
Sbjct: 304 GIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVEY 363

Query: 365 GFRLPSALDNRPLKFEEFEQICPQTIYVSATPGDYELKKTDGEIVEQVVRPTGLLDPVIE 424
           GFRLPSALDNRP++F+E+E I PQTI+VSATPG+YE +   G ++EQ+VRPTGL+DP IE
Sbjct: 364 GFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHA-GRVIEQLVRPTGLVDPEIE 422

Query: 425 VRPVATQVDDVLSEIQKRVELDERVLITTLTKRMAEDLSEYLNEHGVKVRYLHSDIDTVE 484
           +RP  TQVDD+LSEI KRV L+ERVL+TTLTKRM+EDL++YL +HGV+VRYLHSDIDTVE
Sbjct: 423 IRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDTVE 482

Query: 485 RIEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 544
           R+EIIRDLRLG FDVLVGINLLREGLDMPEVSLVAILDADKEGFLR+ERSLIQTIGRAAR
Sbjct: 483 RVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 542

Query: 545 HVNGKAILYADSITKSMKKAMDETERRREKQMAHNEANGITPMRLNKPITDIMD----LG 600
           ++NG+AILYAD IT SM++A+ ET+RRR+KQ+A N  NGITP  + K + DIM+     G
Sbjct: 543 NLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATVPG 602

Query: 601 DSAHPASGKVRLRKVEEKKKQQKTASATELMDQITELEKQMFEYARELEFEKAASLRDDI 660
             +    G  +  + E  K + +  S +E+  +I +LE++M++ AR+LEFE AA  RD+I
Sbjct: 603 SRSKKRKGMAKAAE-ESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDEI 661

Query: 661 EALRKQVVTL 670
             LR++++ +
Sbjct: 662 GKLRERLLAV 671