Pairwise Alignments

Query, 671 a.a., Excinuclease ABC subunit B from Alteromonas macleodii MIT1002

Subject, 690 a.a., excinuclease ABC, B subunit from Dechlorosoma suillum PS

 Score =  906 bits (2342), Expect = 0.0
 Identities = 454/662 (68%), Positives = 544/662 (82%), Gaps = 4/662 (0%)

Query: 5   FELHSKYKPAGDQPKAIEALVDGLESGLAGQTLLGVTGSGKTFTMANVIKEVQRPTLILA 64
           + LH  + PAGDQP+AI  LV+GLE GL+ QTLLGVTGSGKT+TMANVI    RP LILA
Sbjct: 21  YRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSGKTYTMANVIARTGRPALILA 80

Query: 65  HNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDHIEQMRL 124
            NKTLAAQLY E +EF P NAVEYFVSYYDYYQPEAYVPS D FIEKD+SINDHIEQMRL
Sbjct: 81  PNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSINDHIEQMRL 140

Query: 125 SATKALMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQYKRN 184
           SATK+L+ERRDVVIVA+VS IYG+GD + Y  M+LHLRQGD   QRDI++RL+E+QY+RN
Sbjct: 141 SATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQGDKAGQRDIIKRLSEMQYERN 200

Query: 185 DLAFERGTFRVRGDVIDIFPADSEKQAVRVELFDDEIDKISLFDPLTGAVDKSVIRATVF 244
           ++ F+RGTFRVRGDVIDIFPA+  + A+RV LFDDEI+ + LFDPLTG +   + R T++
Sbjct: 201 EVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETLQLFDPLTGHLLHKLPRFTIY 260

Query: 245 PKTHYVTPREKILNAIEHIKEELGDRKKQLQEANKLIEEQRISQRTQFDIEMMMELGYCS 304
           P +HYVTPR  +L A+E IKEEL  R +   +  +L+E QRI QRT+FD+EM+ ELG+C 
Sbjct: 261 PSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQRIEQRTRFDLEMLNELGFCK 320

Query: 305 GIENYSRYLSGRAPGEPPPTLLDYFPADGLMFIDESHVTVSQVGAMYRGDRSRKETLVEF 364
           GIENYSR+LSGR PGE PPTLLDY P D LMFIDESHV + QVGAMY+GDRSRKE LV++
Sbjct: 321 GIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAIGQVGAMYKGDRSRKENLVDY 380

Query: 365 GFRLPSALDNRPLKFEEFEQICPQTIYVSATPGDYELKKTDGEIVEQVVRPTGLLDPVIE 424
           GFRLPSALDNRPLKFEEFE++  QTI+VSATP DYE K+  G++VEQVVRPTGL+DPV+ 
Sbjct: 381 GFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYE-KQHQGQVVEQVVRPTGLIDPVVL 439

Query: 425 VRPVATQVDDVLSEIQKRVELDERVLITTLTKRMAEDLSEYLNEHGVKVRYLHSDIDTVE 484
           VRP  TQVDD+LSEI+KR+ + ERVL+TTLTKRMAEDL++YL E+G+KVRY+HSDIDTVE
Sbjct: 440 VRPAMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDYLRENGIKVRYVHSDIDTVE 499

Query: 485 RIEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 544
           R+EIIRDLRLG+FDVLVGINLLREGLD+PEVSLVAILDADKEGFLR+ERSLIQTIGRAAR
Sbjct: 500 RVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 559

Query: 545 HVNGKAILYADSITKSMKKAMDETERRREKQMAHNEANGITPMRLNKPITDIMDLGDSAH 604
           H+NG AILYAD +T SM++AMDETERRR KQMAHNEA+GITP  ++K I DI+   D  +
Sbjct: 560 HLNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGITPKGVSKRIKDII---DGVY 616

Query: 605 PASGKVRLRKVEEKKKQQKTASATELMDQITELEKQMFEYARELEFEKAASLRDDIEALR 664
                 +  K  +++   +T S   L  +I  LEKQM E A+ LEFEKAA+ RD++  L+
Sbjct: 617 DPDAAQKELKAAQQQAVYETMSEKNLAKEIKRLEKQMLESAKNLEFEKAAAARDELFRLK 676

Query: 665 KQ 666
           +Q
Sbjct: 677 QQ 678