Pairwise Alignments

Query, 373 a.a., Phage shock protein F from Alteromonas macleodii MIT1002

Subject, 381 a.a., psp operon transcriptional activator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  297 bits (761), Expect = 3e-85
 Identities = 167/365 (45%), Positives = 229/365 (62%), Gaps = 21/365 (5%)

Query: 11  LGQSNSFLEVLEQISQIAPLDKPVLVIGERGTGKELIAARLHFLSKRWDQNYIKLNCAAL 70
           LGQS +FL   E++S++A +D+PVL++GERGTGKEL AARLHFLS+RW   ++ L+ A+L
Sbjct: 17  LGQSEAFLAFQEELSRVAKVDRPVLLVGERGTGKELAAARLHFLSRRWQGPFVILDGASL 76

Query: 71  SESLLESELFGYEAGAFTGASKRREGRFEVAHNGTLFLDELANTSGLIQEKLLRVVEYGE 130
           S SL E+ELFG+EAGAFTGA+ RR GRFE A  GTLFLDE  N    +Q+KLLRVVEYG+
Sbjct: 77  SPSLAEAELFGHEAGAFTGAAMRRPGRFERADGGTLFLDEAGNLPLSVQDKLLRVVEYGQ 136

Query: 131 FERVGGSKSVKTDVRLIAATNEDLPALADAGEFRADLLDRLAFDVITIPPLRERREDIMM 190
           +ERVGG++ ++ DVR++AATN DLP L   G FRADLLDRLAF V+ +PPLR R +D+++
Sbjct: 137 YERVGGTQRLEADVRIVAATNADLPGLVRQGRFRADLLDRLAFCVLHLPPLRARGDDVLL 196

Query: 191 LAENFAINMAREMEMELFSGFTEKAKRTLLDYDWPGNIRELKNVVERAVYRTNNPHLPVH 250
           LAE+FA   A E  +     F+ +A+R LL Y WPGNIREL+N +ER V +     +   
Sbjct: 197 LAEHFATRFAMEAGLP-EPEFSTQARRALLTYAWPGNIRELRNTIERCVLKAEGGIITAL 255

Query: 251 EIVLDPFESAYR--------------PKGRVKTNDRVNTPDSPVTQSPSEAAATNERIES 296
           +    PF S ++              P G   T    + PD      P++ A  +    +
Sbjct: 256 DTT--PFASPWQHGPAVHADATAVSTPAGGGATPGPASAPDI----DPADTAMQHGDSGT 309

Query: 297 ADITPLAPVKKPEIVEYPIDLKERSQQHEIDMIKQALADSQFNQKKTAEKLSLTYHQLRG 356
           A  TP A    P+       L +  +  E D ++ ALA ++ N++  AE L LTY Q RG
Sbjct: 310 ATTTPTASSPNPQAWTQGTTLPDAVRHLEEDALRGALARTRHNRRAAAELLGLTYDQFRG 369

Query: 357 YLKKY 361
             +++
Sbjct: 370 LYRRH 374