Pairwise Alignments

Query, 461 a.a., Flagellar hook protein FlgE from Alteromonas macleodii MIT1002

Subject, 260 a.a., flagellar basal-body rod protein FlgG (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 87.0 bits (214), Expect = 6e-22
 Identities = 54/128 (42%), Positives = 76/128 (59%), Gaps = 14/128 (10%)

Query: 6   ALSGVSAAQKDLDVTANNIANVNTVGFKESRAEFGD-VYAASLLSGGKT----------K 54
           A +G+ A Q ++DV ++N+ANVNT GFK+SRAEF D +Y    ++G  T          +
Sbjct: 8   AATGMVAQQLNIDVISHNLANVNTSGFKKSRAEFEDLMYQNMRIAGSATEGDSRIPVGIQ 67

Query: 55  VGDGVLTQEVAQQFSQGSLQFTNTSLDLAITGNGFFATVPEITSRDFSFTRAGQFKLDSD 114
           VG GV    V + FSQG  Q +   LD+AI G+GFF     + + +  +TRAG FKL+ D
Sbjct: 68  VGMGVRPTAVHKFFSQGDFQNSGNPLDIAIEGDGFFQV---LVNGEPRYTRAGAFKLNQD 124

Query: 115 NFVVNSNG 122
             VV +NG
Sbjct: 125 GTVVTANG 132



 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 31/106 (29%), Positives = 53/106 (50%)

Query: 356 GLVRATFSNGTSEPIVRVALVRFSNEQGLTQESSTQWKESILSGEALAGEATTGTFGEIN 415
           G + A  +NG       + L  F N  GL       +  S  SGEA+ G       G + 
Sbjct: 154 GHIAALDANGQELAAADIPLYTFINPAGLDAIGRNLYVPSEASGEAVEGVPGEDNVGTLA 213

Query: 416 SSALEQANVNLTTELIDMIIAQRNFQANSRALEVNNSLNQTILNIR 461
              LE +NV +  E+++MI+ QR ++ NS+A+  ++ + QT +N++
Sbjct: 214 QGFLEMSNVEVVDEMVNMIVGQRAYEMNSKAISTSDQMLQTAVNLK 259