Pairwise Alignments

Query, 372 a.a., Vi polysaccharide export inner membrane protein VexD from Alteromonas macleodii MIT1002

Subject, 317 a.a., polysaccharide export-assoiated protein from Sinorhizobium meliloti 1021

 Score =  124 bits (311), Expect = 4e-33
 Identities = 78/305 (25%), Positives = 153/305 (50%), Gaps = 6/305 (1%)

Query: 63  MAAGVSGASGGTESQLVEAYIQSADMIKYLDETIGLRDHYMSNKADLFSGLSSSHKQEDF 122
           M    SG S  ++S ++  YI S  M    D    L D Y +   D F G+ S    ED 
Sbjct: 1   MFTQASGGSTVSDSYILMDYILSERMAADADRRFKLEDVYATRGLDYFYGIGSDLPIEDK 60

Query: 123 YQFYLNHIEVSVDSASSVISLRTRAFDAEYAQIINQAIVDKAEEFINNINNNLAKSKLTF 182
             ++ + ++V+ D AS ++ +  +AF+   AQ I + IVD+++  +N+++ +     L  
Sbjct: 61  LAYWRDMVKVNFDHASGIMQVTVKAFEPAQAQEIAKFIVDQSDNLVNSLSLSARNDVLRA 120

Query: 183 AKGEHEIVEQKLQQAKTEILGFQSKYNVLDPTAEGAAFQQIAFSLEATLAQKKAELSTMS 242
           A+ E    E +L +A+  +  ++ K   + P        Q+   LE  L +  A+L+T  
Sbjct: 121 AQDEVLAGEARLSKARAGLRDYRDKSQEISPEEGAKLAVQLIGGLEGELTKLNADLATAK 180

Query: 243 TMMSNVAPEVINIKREIAALQKEVEKQKERI------STAEGESEALSVSELMAQYSNLQ 296
           + M    P +  +K  I +L++++  +++R+      ++A  +  A  V+  +A++  L+
Sbjct: 181 SQMGEDTPRIRVLKTRIESLEQQLAVERQRLGAGEKGTSAANDPNAPDVAGRIAEFEELE 240

Query: 297 VQLQLAIQAYSSSLITLENARVEAYQKLQHLVTVESPTLPDDNAYPTVIYNLVLFGVSLL 356
            + + A +AY+++L +LE AR++A  + ++L     PTL     YP+ + N  L  + LL
Sbjct: 241 TEREFAERAYTAALGSLEKARIDANNRQRYLALFIEPTLSQMAQYPSRLLNAFLVTLGLL 300

Query: 357 LIYGI 361
             +G+
Sbjct: 301 FAWGV 305