Pairwise Alignments

Query, 303 a.a., putative secretion ATPase, PEP-CTERM locus subfamily from Alteromonas macleodii MIT1002

Subject, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (712), Expect = 2e-79
 Identities = 149/306 (48%), Positives = 199/306 (65%), Gaps = 9/306 (2%)

Query: 1   MYLNYFGLNDNPFSIAPNPDYLYMSPRHKEALAHLTFGLRESGGFVMLTGEVGTGKTTVS 60
           MYLN+FG ++ PFSI PN  YLY+S RH+EA+ HL  GL + GGF MLTGEVGTGKTTV+
Sbjct: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60

Query: 61  RKLLQQLPDNTQVAMILNPTLSALELLATVCDELGLAYTPEKASLKYFTDLILSKLAENH 120
           R +L  LP  T+  MILNPT S LELL  +CDE  ++Y P+KA+LK  T ++   L   H
Sbjct: 61  RAILASLPGKTRAGMILNPTFSDLELLEAICDEFEVSY-PKKATLKKLTQVLHEFLLAEH 119

Query: 121 QSGMNTVLMVDEAQHLLPEVLEQLRLLTNLETNREKLLKVVLIGQPELQQLLKRNELRQL 180
             G+  +LM+DEAQHL P+VLEQLRLLTNLET   KLLKV+LIGQPELQ+ L+  +LRQL
Sbjct: 120 AQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQL 179

Query: 181 AQRITARYHLLPLTAPEVSAYIAHRLSVAEGDISIFSKSTLRAVHQITGGIPRVINLLCD 240
           AQRIT RYHLLPL   + + YI  R+  A G+  +F++   + + + T GIPR+INL+CD
Sbjct: 180 AQRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVCD 239

Query: 241 RALTLSFTKQHAVVQKPIFLAAAEQILG-----EDVVSQRVQSQRKWYLASA---FVLAI 292
            AL  ++      +       A ++++        V S +    +  YL+SA     LA+
Sbjct: 240 AALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLSYLSSALGGIALAV 299

Query: 293 IFGYGL 298
           +  + L
Sbjct: 300 VLAWQL 305