Pairwise Alignments

Query, 455 a.a., Periplasmic pH-dependent serine endoprotease DegQ precursor from Alteromonas macleodii MIT1002

Subject, 505 a.a., PDZ domain-containing protein from Ralstonia solanacearum GMI1000

 Score =  277 bits (709), Expect = 5e-79
 Identities = 174/466 (37%), Positives = 255/466 (54%), Gaps = 65/466 (13%)

Query: 39  VPSLAPMLEEATPAVVSIAVEG-----TQTSTQRVPEMFRYFFGAPQE------------ 81
           +P  A ++E+ +PAVV+I            S   + E FR FFG P              
Sbjct: 44  LPDFADLVEKVSPAVVNIRTTEKVRMQNNPSDDDMAEFFRRFFGVPMPGTPGQGQGQKRR 103

Query: 82  ----QVQERPFRGLGSGVIIDADKGYVVTNNHVVDNADEITVKLTDGREFKAKKLGSDEQ 137
               Q +E   RG+GSG I+  D GYV+TN HVV+ A+ I V LTD REFKAK +GSD++
Sbjct: 104 NAPPQAEEEQSRGVGSGFIMSGD-GYVLTNAHVVEGAETIYVTLTDKREFKAKLIGSDKR 162

Query: 138 SDIALLKIEPDDLKALPLADSDALRVGDFVVAIGNPFGLSQTVTSGIVSALGRSGLNIGG 197
           +D+AL+K+E   L +L L DSD +RVG++V+AIG+PFGL  TVT+GIVSA GR   + G 
Sbjct: 163 TDVALVKVEATGLPSLKLGDSDKVRVGEWVLAIGSPFGLDNTVTAGIVSAKGR---DTGD 219

Query: 198 YEDFIQTDAAINRGNSGGALVNLHGELVGINTAIFGPNGGNVGIGFAIPANMMKSLIDQI 257
           Y  FIQ+D A+N GNSGG L+NL GE++GIN  IF  +GG +GI FAIP +    + +Q+
Sbjct: 220 YLPFIQSDVAVNPGNSGGPLINLRGEVIGINNQIFSQSGGYMGISFAIPIDEAMRVAEQL 279

Query: 258 AEFGEVRRGLLGILGSDIDAGLAEAMNAEVNIGAFVSEVQPDSAAEKGGLQAGDIITAIN 317
              G V RG +G+   ++    AE++      GA+V  V+    A+K G++AGDI+   N
Sbjct: 280 KTQGRVTRGRIGVAIDNVPKDAAESLGLGRARGAYVGNVESGGPADKAGIEAGDIVLKFN 339

Query: 318 GRKLHSFQELRAKIASMGAGAEVELTVMRKGKKMNVDVVLDDATDTTVTAAQIHPAL--- 374
           GR +    +L+ ++     G    + V RKG             D TVT A++ P     
Sbjct: 340 GRDVEKAGDLQRQVGESKPGTRATVQVWRKGA----------TRDLTVTVAELQPDTKVA 389

Query: 375 ---EGATLSNGTDDAGN---AGVVVSDIERGA-----------------PAARIGLQSDD 411
              +G    NG   AG     G+VV+D+  GA                 PAAR G++  D
Sbjct: 390 QRGKGGQSDNGQPGAGKQNALGLVVADLSEGAQREFKTKAGVEVQVADGPAARAGIRPGD 449

Query: 412 VIIGVNRVRTSTVAEFRNA---LDEAKGVIALNVKRGNSTLYLVIR 454
           VI+ V     ++  +F +    LD+++ ++A+ V+RG++T  + +R
Sbjct: 450 VILRVGDTDVTSAKQFNDVVGRLDKSR-MVAVFVRRGDATQVVTMR 494