Pairwise Alignments

Query, 318 a.a., Inner membrane protein YrbG from Alteromonas macleodii MIT1002

Subject, 312 a.a., Na+/Ca+ antiporter, CaCA family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  191 bits (484), Expect = 3e-53
 Identities = 112/309 (36%), Positives = 176/309 (56%), Gaps = 16/309 (5%)

Query: 10  VGLIVLSWSADRFVYGASALAKNIGISPMMIGLTIVAMGSSAPEIVVSAIASANGNMNTA 69
           +GL++L  + D  V GA  L+  +GI  +++ LTIVA G+SAPE+++S  A  +G    A
Sbjct: 8   LGLVILVLAGDSLVKGAVNLSLRVGIPALIVSLTIVAFGTSAPELLISIAAVKDGAPGLA 67

Query: 70  VGNALGSNITNIALVLGITALVKPLLVSSTTLKRELPALLIISLIAIGFMFDGELKSYEG 129
           +GN +GSN  NI LVLGI AL+  L  +    +R    +L  +++ I   F G +    G
Sbjct: 68  LGNVVGSNTANILLVLGIPALLAGLHTADCDTRRSYVQMLAATILFIAVCFLGPITWMHG 127

Query: 130 IILLGLFIFVLAMMAWLSLQVDKEDPLVAETADEIPKGVSNTSALIW------IGVGLVI 183
           ++LL       A + W+     +E         E+ +       + W      + +GLV 
Sbjct: 128 LVLL-------AALGWMLFDAFREAKAHKNALPEVEEVEGADPDMPWWRIVMFLFLGLVG 180

Query: 184 LPLSAHFLVNSAVEIARYMGISDLVIGLTIIAFGTSLPELAASVAGVLKGEDDLALGNII 243
           LPL A  LV++++ IAR  GIS+ VIGLT++AFGTSLPELA +V   ++ + D+ALGN+I
Sbjct: 181 LPLGADLLVDASINIARAFGISEEVIGLTLVAFGTSLPELATTVMASIRRQADVALGNVI 240

Query: 244 GSNIFNLLAVLGMPGLIAPGILDPDVYNRDMYVMLGLTLLLFLFSFDLIGKRTISRTNGF 303
           GSN+FNLLA++G+  ++    +  +    D++VMLG +LLL  F +  +    + RT G 
Sbjct: 241 GSNMFNLLAIIGITAMVGDIPVSAEFLTFDLWVMLGASLLLIPFVYFRV---NLKRTAGV 297

Query: 304 ILLACFIGY 312
           +L   ++ Y
Sbjct: 298 VLTGLYVAY 306



 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 61/131 (46%), Positives = 81/131 (61%), Gaps = 6/131 (4%)

Query: 178 GVGLVILPLSAHFLVNSAVEIARYMGISDLVIGLTIIAFGTSLPELAASVAGVLKGEDDL 237
           G+GLVIL L+   LV  AV ++  +GI  L++ LTI+AFGTS PEL  S+A V  G   L
Sbjct: 7   GLGLVILVLAGDSLVKGAVNLSLRVGIPALIVSLTIVAFGTSAPELLISIAAVKDGAPGL 66

Query: 238 ALGNIIGSNIFNLLAVLGMPGLIAPGILDPDVYNRDMYV-MLGLTLLLFLFSFDLIGKRT 296
           ALGN++GSN  N+L VLG+P L+A G+   D   R  YV ML  T+L     F  +G   
Sbjct: 67  ALGNVVGSNTANILLVLGIPALLA-GLHTADCDTRRSYVQMLAATILFIAVCF--LG--P 121

Query: 297 ISRTNGFILLA 307
           I+  +G +LLA
Sbjct: 122 ITWMHGLVLLA 132



 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 56/142 (39%), Positives = 90/142 (63%), Gaps = 3/142 (2%)

Query: 5   IVIFL-VGLIVLSWSADRFVYGASALAKNIGISPMMIGLTIVAMGSSAPEIVVSAIASAN 63
           IV+FL +GL+ L   AD  V  +  +A+  GIS  +IGLT+VA G+S PE+  + +AS  
Sbjct: 170 IVMFLFLGLVGLPLGADLLVDASINIARAFGISEEVIGLTLVAFGTSLPELATTVMASIR 229

Query: 64  GNMNTAVGNALGSNITNIALVLGITALVKPLLVSSTTLKRELPALLIISLIAIGFM-FDG 122
              + A+GN +GSN+ N+  ++GITA+V  + VS+  L  +L  +L  SL+ I F+ F  
Sbjct: 230 RQADVALGNVIGSNMFNLLAIIGITAMVGDIPVSAEFLTFDLWVMLGASLLLIPFVYFRV 289

Query: 123 ELKSYEGIILLGLFI-FVLAMM 143
            LK   G++L GL++ +V+A++
Sbjct: 290 NLKRTAGVVLTGLYVAYVVALL 311