Pairwise Alignments

Query, 318 a.a., Inner membrane protein YrbG from Alteromonas macleodii MIT1002

Subject, 328 a.a., putative Na+/Ca2+ exchanger protein, cation antiporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  200 bits (508), Expect = 4e-56
 Identities = 116/322 (36%), Positives = 187/322 (58%), Gaps = 14/322 (4%)

Query: 3   LNIVIFLVGLIVLSWSADRFVYGASALAKNIGISPMMIGLTIVAMGSSAPEIVVSAIASA 62
           +NI++ + GLI++   A+    GA+++AK   I  ++IGLTIVA G+SAPE+ VS  ++ 
Sbjct: 1   MNILLLIGGLILILLGANGLTDGAASVAKRFRIPSIVIGLTIVAFGTSAPELTVSVASAL 60

Query: 63  NGNMNTAVGNALGSNITNIALVLGITALVKPLLVSSTTLKRELPALL---IISLIAIGFM 119
            G+ + A+GN +GSNI N  +++G TAL  P++++  TL++E+P  +   ++ LI    +
Sbjct: 61  KGSADIAIGNVVGSNIFNTLMIVGCTALFAPIIITRNTLRKEIPLCILSSVVLLICANDI 120

Query: 120 F-----DGELKSYEGIILLGLFIFVLAMMAWLSLQVDKEDPLVAETADEIP----KGVSN 170
           F     +  L   +G++LL  F   +     ++       P  A      P    K +S 
Sbjct: 121 FLDNATENILNRVDGLLLLCFFAIFMGYTFAIAFPKSSAAPEPAAPEHTAPEEEIKLLSW 180

Query: 171 TSALIWIGVGLVILPLSAHFLVNSAVEIARYMGISDLVIGLTIIAFGTSLPELAASVAGV 230
             ++++I  GL  L       VN A  IAR MG+S+ +IGLT++A GTSLPELA S+   
Sbjct: 181 WKSILYIIGGLAALIYGGQLFVNGATGIARSMGVSESIIGLTLVAGGTSLPELATSIVAA 240

Query: 231 LKGEDDLALGNIIGSNIFNLLAVLGMPGLIAPGILDPDVYNRDMYVMLGLTLLLFLFSFD 290
           LK   ++A+GN+IGSN+FN+  VLG    I P  L   + N D++ ++G ++LL+LF   
Sbjct: 241 LKKNPEMAIGNVIGSNLFNIFFVLGCSASITPLHLS-GITNFDLFTLVGSSILLWLFGL- 298

Query: 291 LIGKRTISRTNGFILLACFIGY 312
              KRTI+R  G I++ C++ Y
Sbjct: 299 FFAKRTITRIEGSIMILCYVAY 320