Pairwise Alignments

Query, 875 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  225 bits (573), Expect = 1e-62
 Identities = 171/545 (31%), Positives = 275/545 (50%), Gaps = 45/545 (8%)

Query: 172 KLQKAYDEAQSANKAKSDFLATMSHEIRTPMNAIIGLTHLALESTDNEQRQQYLEKVQRS 231
           +L  A   AQ A + KS+FLA MSHE+RTP+N +IG T   L++     +  YL+ +++S
Sbjct: 276 ELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKS 335

Query: 232 STALLDLMNSILDFSKVEADKIEIIDEPFTLTKTIDKLAQVFQVKAQQKQLQLLFDIRCH 291
           +  LL ++N ILDFSK+EA K+ + + PF   + ++++  +    A +K L++   I   
Sbjct: 336 ANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPK 395

Query: 292 TNLQCRGDSEKIYQVLLNLLSNAIKFTASGHVILTVEKRENQ-----LAFSVSDTGMGIS 346
                 GD  +I QVL NL+ N+IKFT  G++ ++VE R  +     L F V DTG+GIS
Sbjct: 396 IPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGIS 455

Query: 347 EQVKSKLFKAFVQADASISREYGGTGLGLAICKRLVELMGGDLTLESEVDKGSCFSFALP 406
           E+ +++LF+AF QADASISR YGGTGLGL I ++LV  MGG+++L S + +GS F F L 
Sbjct: 456 ERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLR 515

Query: 407 VCSDEGPGTGPQLPVSVPDNVLCIQTHESVSQGCEILAATLNRHNIHC----------QI 456
           + + E P        S+    L +   E   Q   I+  TL +  +             +
Sbjct: 516 LHTTELPLNDGYNADSLNHRHLLL--IEPNMQAAAIVQQTLVQSGLEVTYRSAIPEEQHV 573

Query: 457 IDQV-EGLLPSKASQTIAFLPDDEQSWNSFIKHMQFGEYQSLNLTTLISPLNKQDVQKRM 515
            D V   L PSK +      P   + W      M       +  T L   L  Q +Q+  
Sbjct: 574 YDYVLLNLAPSKETN-----PTLVELWVQRALAMTHNVIVGVPSTEL--ALADQLMQR-- 624

Query: 516 GSALVQNINIIELPFTDTELISTLSPAQLSLSKRTIEGLESRKWRTRRLLNKHVLVVDDD 575
                  +  I  P +  +L+ TL+  Q  L+  ++   ++ K      L   V+ VDD+
Sbjct: 625 -----YPVKCISKPLSRKKLLQTLAAQQPQLANTSLPKPQADK------LPLCVMAVDDN 673

Query: 576 AISVEISQQILSDLGINVAVASSGEQALALCEMSKFDAILLDCYLPGVSGYEVAEQLTQK 635
             ++++   +L +    V   +SG++A+   +  +FD IL+D  +P + G    + + Q 
Sbjct: 674 PANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQL 733

Query: 636 KDWY-TPIIALSADESQEASESALTAGMCQHLVKPATADEIVHTIDIH-----IHSGYIE 689
           K +  TP+IA++A       +  L AGM  +L KP   + I+  + +H           +
Sbjct: 734 KGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKP-IEEHILQQVLVHWSPHTRSKQVAK 792

Query: 690 ITPPD 694
           +TPPD
Sbjct: 793 VTPPD 797