Pairwise Alignments

Query, 716 a.a., Fatty acid oxidation complex subunit alpha from Alteromonas macleodii MIT1002

Subject, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

 Score =  390 bits (1002), Expect = e-112
 Identities = 254/726 (34%), Positives = 387/726 (53%), Gaps = 41/726 (5%)

Query: 7   SLSVSLLEDGFAELVFDAQGSVNKFDRQTVSELDEATQALL--AKGDVKGLVVRSAKPA- 63
           +  +S  E  +A L  D  G      +   +E  +A  A L   +G +KGL++ S KP  
Sbjct: 6   AFQLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDN 65

Query: 64  FIVGADITEFTGLFAMDDAEVLQWVANTSQVFDRFEDLPFPTIAAVNGFALGGGCEMALA 123
           FI GAD+       ++ +A+ L   +   Q+F +  DLPFP +AA++G  LGGG E+ALA
Sbjct: 66  FIAGADVRMLEACQSVHEAQAL--ASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALA 123

Query: 124 CDMRIA--DTTASIGLPEVKLGLMPGFGGTVRLPRLIGSDNALEWMTTGRDRKGAKALAE 181
           CD R+   D    +GLPEV LGL+PG GGT RLPRLIG   AL+ + TG+  +  KA   
Sbjct: 124 CDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKL 183

Query: 182 GAVDAVVAPEALVEGALSMVKDAADGKFDWQSRRAVKKAPLQLNKNEAMMSFSTAQAMVF 241
           G VDA V    L++ A  ++++    K      RA    P+   K + + +    + ++F
Sbjct: 184 GVVDACVPHSVLLDVAKRLLEEKGHKK------RAQVTLPI---KEKLLANTDLGRKLIF 234

Query: 242 AQAGK--------HYPAPHKMVETVQKAAGLDRDGALKLENEGFVALAKTDAAKAQIGIF 293
            QA K        +YPA   ++E +Q          L+ E + F  L  T  +KA   IF
Sbjct: 235 DQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIF 294

Query: 294 LADQLVKSKGKKQAKAATKQSKLNAVLGAGIMGGGIAYQSAVKG-TPVIMKDI-NQGALD 351
            A   +K      AK A   +    VLG G+MG GI++ +  K  T V +KD+ N G L+
Sbjct: 295 FATTEMKKDLGADAKPAPVAAV--GVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLN 352

Query: 352 LGLSEAAKILGKGMQRGKVDATKMAQTLNAITPTLEYSTLKDADLVIEAVVENPKVKGIV 411
             L+   K+  K  QR  +   ++   ++ ++    +      D+VIEAV E+ K+K  +
Sbjct: 353 -ALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQM 411

Query: 412 LKEVEDNVADDAIICSNTSTISINQLAESLDKPERFCGMHFFNPVHRMPLVEIIRGEKTS 471
           + ++E N     I  +NTS++ I+Q+A    +P+   G+H+F+PV +MPLVE+I    TS
Sbjct: 412 VADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTS 471

Query: 472 EETINAVVAATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVDKVMEKI 531
           +ETI  VV    K GKTPIVV DC GF VNR+L PY    +++L+ G     +D  +   
Sbjct: 472 DETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLD- 530

Query: 532 FGWPMGPAYLMDVVGIDTGDHAADVMAAGIPERMARLDN-DPVTLFYKEERLGQKNGKGF 590
           FG+P+GP  L+D VG+D G   A +M   + E   R    D   +  K+ R G+K+GKGF
Sbjct: 531 FGFPVGPITLLDEVGVDIG---AKIMPILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGF 587

Query: 591 YNYGVDKRGKPSKTPAEEAYALMAPHVAKKTDFEADDIIARLMIPMANEAIRCLEEGIVD 650
           Y Y    +G   K   +  Y L+   +  ++     +I  R ++PM NEA+RCL+EGI+ 
Sbjct: 588 YTY----KGSKKKEVDKSVYKLL--KLTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIR 641

Query: 651 SAAEADMALLYGLGFPPFRGGIFRWIETIGLANFVAMADKYAE-LGPIYQISDGVREMAA 709
           SA + DM  ++G+GFPPF GG FR+++T+GL   V M +++ E  G  +   DG+   A 
Sbjct: 642 SARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFAPCDGLLTRAG 701

Query: 710 SGKSYF 715
            G+ ++
Sbjct: 702 LGEKFY 707