Pairwise Alignments

Query, 500 a.a., hypothetical protein from Alteromonas macleodii MIT1002

Subject, 387 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  313 bits (802), Expect = 7e-90
 Identities = 179/422 (42%), Positives = 239/422 (56%), Gaps = 62/422 (14%)

Query: 75  GAERYSKYLPLLADKRVSLVVNQSALVSSHSALPSSKVEPEERESSNSLAAQKNKIKTSQ 134
           GAER  +YLPL+  KRV +VVN +++V +                               
Sbjct: 28  GAERMDQYLPLIKGKRVGMVVNHTSIVGTEPI---------------------------- 59

Query: 135 RNQHLLDALLQRSVNVVSVMSPEHGFRGDKGAGEKVDSNIDAKTGIPIHSLYGATKKPTP 194
              HLLD LL++ +++V V +PEHGFRG+  AGE V    D++TG+ I SLYG  KKPT 
Sbjct: 60  ---HLLDTLLKQKIDIVKVFAPEHGFRGNADAGETVKDGKDSRTGVTIVSLYGDNKKPTA 116

Query: 195 DMLDGIDVIVFDIQDVGVRFYTYLSTLHYVLEAAFARNIDVIVLDRPNPNGRYVDGPVLQ 254
             L  IDVI+FDIQDVG RFYTY+ST++YV+EA      ++I+LDRPNP   YV+GPVL+
Sbjct: 117 AQLKDIDVILFDIQDVGARFYTYISTMYYVMEACAENKKEMIILDRPNPCD-YVEGPVLK 175

Query: 255 SEFSSFIGMHPIPVLHGMTLGELAQMIVGEQWLDIDVSSYDNAKLTVVPVQDYQRTAHYS 314
           + + SF+GM P+PVLHG T+GELAQMI GE W+     +     LTV+PV+ ++    Y+
Sbjct: 176 AGYKSFVGMLPLPVLHGCTIGELAQMINGEGWMTTQAKT---CPLTVIPVKGWKHGQPYA 232

Query: 315 LPVAPSPNLPNDLSILLYPTLCFFEGTDVSIGRGTDFPFQLIGHPFVEFGKTEIPVNANS 374
           LPV PSPNLPN  SI LY +LC FE T VS+GRGT FPFQ++G P  ++G          
Sbjct: 233 LPVKPSPNLPNAQSIRLYASLCPFEATRVSVGRGTTFPFQVLGTPNKKYGD--------- 283

Query: 375 AAPHPKHENTLLSAHVFSYADPTIFEGSDSKQTTHKRSPISGLDIATLIDAYSRFSEYNK 434
                           F++  P    G D K   HK     G D+  + D       Y  
Sbjct: 284 ----------------FAFT-PRSLPGFD-KNPMHKGVTCYGEDLRNVTDVNGFTLRYFL 325

Query: 435 MISASNASEETFFTRPDFFDKLAGTDALRIQIQTGKTPTEIRQSWQKDLNKFRERRKAYL 494
                +     FF+RP +FD L GTD++R  I  G++  EIR SWQK+L  +R+ R+ YL
Sbjct: 326 RFYRLSGEGAAFFSRPRWFDLLMGTDSVRKAILKGESEEEIRDSWQKELQTYRDMRQKYL 385

Query: 495 LY 496
           LY
Sbjct: 386 LY 387