Pairwise Alignments

Query, 258 a.a., Deoxyribonuclease TatD from Alteromonas macleodii MIT1002

Subject, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (283), Expect = 3e-30
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 6/244 (2%)

Query: 12  DKRFDADEVIQRAKDAGVEKLCIITTHPSEWDAAVALYNKYPTQCCYTIGVHPHNAKDVT 71
           D   D  +V+ +A  A VE L  +      +   +A+   + +Q   + GVHP + +   
Sbjct: 16  DLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPF-SQVYASCGVHPLDVQSDF 74

Query: 72  PSDYKRLRELAQQKGCVAIGECGLDFNRNFSPQPVQLAVFEAQLDIAAALDLPVYLHERD 131
             D     + AQ    VAIGE GLD++       +Q   F  Q++ A AL+ P+ +H R+
Sbjct: 75  SLDL--FHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETAVALNKPLIIHTRN 132

Query: 132 AFDEQVALLTEYMPRIKGGIAHCFTGNAEQVQHYLALGLYIGITGWVCDEKRGEALREAV 191
           A  + + LL E   +  GG+ HCFT +    Q  + LG YI I+G +   ++   L+E V
Sbjct: 133 AQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISG-IVTFRQATDLKEVV 191

Query: 192 KSIPLNRLILETDAPYLFPKTLRPRKRNNEPAFLPHIAKQLGEYLQVETDKLRISSYANS 251
           K++PL+RL++ETD+PYL P  +  R + N+PA++  +A  +     V   ++   +  N 
Sbjct: 192 KALPLDRLLIETDSPYLAP--VPHRGKENQPAYVVEVAAYIAALKGVSLTEVAQKTTQNF 249

Query: 252 CELF 255
             LF
Sbjct: 250 QNLF 253