Pairwise Alignments

Query, 306 a.a., putative peptidoglycan binding protein from Agrobacterium fabrum C58

Subject, 116 a.a., Peptidoglycan-binding domain 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 49.3 bits (116), Expect = 4e-11
 Identities = 27/77 (35%), Positives = 40/77 (51%)

Query: 124 PAADSQKPQQIVADIQAELKKRGLYEGDADGRMGPKTAAAIMFFEETLGMEQTGEPTTRV 183
           P A +   + ++ +IQ +L  RG   G  DG MG +T AAI  +++  G+  TGE T  +
Sbjct: 32  PFAGAPSDRAVIREIQGDLAGRGYDPGPVDGVMGGRTRAAIRGYQKDAGLPVTGEATAAL 91

Query: 184 LAALKIDGATVAAIPKD 200
            A L+ D  T   I  D
Sbjct: 92  AAKLRGDRTTARHIQPD 108



 Score = 46.2 bits (108), Expect = 3e-10
 Identities = 26/63 (41%), Positives = 34/63 (53%)

Query: 239 AAKPASRDLISRIQQGLINIAYADVKVDGVAGQQTRNAIRAFEKHYRLPETGEPSEVVLK 298
           A  P+ R +I  IQ  L    Y    VDGV G +TR AIR ++K   LP TGE +  +  
Sbjct: 34  AGAPSDRAVIREIQGDLAGRGYDPGPVDGVMGGRTRAAIRGYQKDAGLPVTGEATAALAA 93

Query: 299 KLK 301
           KL+
Sbjct: 94  KLR 96