Pairwise Alignments

Query, 833 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 1222 a.a., PAS/PAC sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  154 bits (388), Expect = 4e-41
 Identities = 109/392 (27%), Positives = 189/392 (48%), Gaps = 21/392 (5%)

Query: 456  LERRLEHAERLQAVGTLAGGIAHEFNNILGAILGYAEMAQNMLRRSSVTRR---HIDQII 512
            LER+L  A++++AVGTLAGGIAH+FNNILG I+   EM    LR + +T R     D+I+
Sbjct: 835  LERQLRQAQKMEAVGTLAGGIAHDFNNILGVIMSNIEM----LRDTGLTGRAATRADRIL 890

Query: 513  SSGDRARLIIDQILTLSRKLERVTKPFSVSELVMEIAPLLRVALQRNIELKFKFDDKKSV 572
             +  RAR ++ Q+L   R  +       +   V +   +++ ++  ++ L+         
Sbjct: 891  RAALRARDVVRQLLAFGRPADEPYATLDLCRTVADALHMVKPSIPASVTLRTLLPVAPLP 950

Query: 573  VEGSPLEVQQMLMNLCKNASQAFTADGQIDIIVSRIFVSRQKVL-AHGVMPAGDYVLLSV 631
            V G   ++ Q+L+NLC NA  A    G +D+ ++ + +   +VL  +  +  G Y  LSV
Sbjct: 951  VHGDITQIHQVLLNLCTNAVHAMPDGGVLDVSLAALVLGGDEVLRGYPELSPGRYACLSV 1010

Query: 632  SDDGEGIAETVLPHIFEPFFTTRSCSGGTGLGLAAVHGHVSALAGYIDVTSAVGRGTRFD 691
            +D G+G+    L  +FEPFFTT+    G+GLGL+ VHG V    G +   S   +G  FD
Sbjct: 1011 ADSGQGMTAAQLERVFEPFFTTKPQGMGSGLGLSMVHGIVRQHGGTVRAHSQPEQGACFD 1070

Query: 692  IYLP--------PSSKKPVSPDAFFGPCKTPRGNGEIVALIEPDPVLREVYEDKIAALGY 743
            + LP         +   P +    + P  TP+     V +++ +   R+   + + ALG+
Sbjct: 1071 VLLPLADMLAAAEAGAAPAATAPEYVP-DTPQERPLHVLVVDDEHDFRQSVAEMLHALGH 1129

Query: 744  EPVGFKTCADLCNWISKGKQADLVLVD--QSSLPENQSATALHA-AFKTASIIIGGSDLK 800
               G    +D    ++ G+  D+ L+D         + A A+ A  F    ++  G++  
Sbjct: 1130 RSTGTSDASDALQLLAAGRY-DVALLDLRMPGGSGTELARAIRARGFALPLVLCTGNECD 1188

Query: 801  MSLSSDDMTSALFLPKPISSRTMAYAIRTKIK 832
            +       T    + KP +   ++  +   +K
Sbjct: 1189 IPPEELAETGLTLIGKPFTGEELSKHLHVSLK 1220