Pairwise Alignments

Query, 308 a.a., ABC transporter, membrane spanning protein (agrocinopine) from Agrobacterium fabrum C58

Subject, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  201 bits (510), Expect = 2e-56
 Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 1/305 (0%)

Query: 1   MISFILARLVRAIIVMMLTVTFVFIILRLGGDPARAMLGENATPEALAAFRTAWGLDRSI 60
           M+ FIL RL + ++V+      VF++ RL GDP   ML  +AT    AAF    GLD+ I
Sbjct: 1   MLEFILRRLFQGVLVVFGVTATVFVVTRLVGDPVALMLPLSATEAQRAAFAQQIGLDQPI 60

Query: 61  PEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGIIAA 120
             QFL ++      DFG S    R    V+ ER+P TL L  +    ++++ IP G ++A
Sbjct: 61  ATQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLGAVSA 120

Query: 121 VRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSGSSTWQHAILPVATFG 180
           +R     D+  M+  +LG ++P F LGL  I +FAV  R LP+SG  T  H +LP  T  
Sbjct: 121 LRPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTAAHLVLPALTLA 180

Query: 181 LVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVTMLGF-VAA 239
           L   A      R+++I+ L +PY+  ARA G+    ++  H L N  +P +++ G+ + A
Sbjct: 181 LTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNILVPFLSISGWELIA 240

Query: 240 GLLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVDVLYAVLN 299
            L G + +VETVFAWPGLG   V+AI   DL ++QA++ +    +V I + +D+L   ++
Sbjct: 241 TLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVLIGIALDILSKAVD 300

Query: 300 PKIRL 304
           P++ L
Sbjct: 301 PRMEL 305