Pairwise Alignments

Query, 308 a.a., ABC transporter, membrane spanning protein (agrocinopine) from Agrobacterium fabrum C58

Subject, 315 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  219 bits (557), Expect = 9e-62
 Identities = 124/314 (39%), Positives = 186/314 (59%), Gaps = 11/314 (3%)

Query: 1   MISFILARLVRAIIVMMLTVTFVFIILRL-GGDPARAMLGENATPEALAAFRTAWGLDRS 59
           M +++L RLV  + V+      VF+++ L  GD A A+LG  ATPE +       GLD+ 
Sbjct: 1   MQAYVLKRLVAVVPVLFGLSIIVFLVMGLIPGDTATAILGSYATPENVERINRDLGLDKP 60

Query: 60  IPEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGIIA 119
           + +Q+ I++ + L+GDFG S A  R V   + ER   TL L   + VL  ++G+ AG+++
Sbjct: 61  LVQQYAIWIGNVLQGDFGRSFALNRPVLDEVLERFQATLVLAGVSLVLCSVIGLLAGVVS 120

Query: 120 AVRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSG----------SSTW 169
           AVR+   AD+ +    + G S P+F LGL LI++FAV +R+LP+SG              
Sbjct: 121 AVRQFGWADRVITFFVLAGISTPSFWLGLLLIYLFAVHWRILPASGMYAVYGRGDLKDLL 180

Query: 170 QHAILPVATFGLVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIP 229
            H ILP AT  +V A  IAR  R A++EVL Q Y+  ARA G+P+  V+  HA   A + 
Sbjct: 181 LHLILPAATLAVVAAGVIARLTRGAMLEVLRQDYVRTARAKGLPERRVIYAHAFRAALVS 240

Query: 230 MVTMLGFVAAGLLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINL 289
           +V  +G  A  +LGG+  VETVF WPG+G+  V+AI+  D+ +VQ  +L+  A  V  NL
Sbjct: 241 VVPAIGIQAGFVLGGAVYVETVFQWPGIGAMLVKAISTRDILLVQGGVLVVAASYVLFNL 300

Query: 290 IVDVLYAVLNPKIR 303
           + DV+ ++L+P+IR
Sbjct: 301 LADVVQSMLDPRIR 314